Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-6P43688 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.1■□□□□ 0.49
Nkx2-6P43688 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-6P43688 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-6P43688 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.1■□□□□ 0.49
Nkx2-6P43688 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Nkx2-6P43688 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx2-6P43688 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx2-6P43688 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx2-6P43688 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.09■□□□□ 0.49
Nkx2-6P43688 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Nkx2-6P43688 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx2-6P43688 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx2-6P43688 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Nkx2-6P43688 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Nkx2-6P43688 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nkx2-6P43688 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nkx2-6P43688 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.08■□□□□ 0.48
Nkx2-6P43688 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.08■□□□□ 0.48
Nkx2-6P43688 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.08■□□□□ 0.48
Nkx2-6P43688 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Nkx2-6P43688 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nkx2-6P43688 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Nkx2-6P43688 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nkx2-6P43688 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Nkx2-6P43688 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.07■□□□□ 0.48
Nkx2-6P43688 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Nkx2-6P43688 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-6P43688 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-6P43688 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-6P43688 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-6P43688 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-6P43688 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-6P43688 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.07■□□□□ 0.48
Nkx2-6P43688 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-6P43688 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-6P43688 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-6P43688 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-6P43688 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx2-6P43688 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Nkx2-6P43688 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.06■□□□□ 0.48
Nkx2-6P43688 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx2-6P43688 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx2-6P43688 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Nkx2-6P43688 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
Nkx2-6P43688 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx2-6P43688 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx2-6P43688 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx2-6P43688 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-6P43688 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-6P43688 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-6P43688 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-6P43688 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.05■□□□□ 0.48
Nkx2-6P43688 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-6P43688 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.05■□□□□ 0.48
Nkx2-6P43688 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-6P43688 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-6P43688 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-6P43688 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-6P43688 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-6P43688 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-6P43688 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Nkx2-6P43688 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
Nkx2-6P43688 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-6P43688 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-6P43688 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-6P43688 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-6P43688 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-6P43688 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-6P43688 Gm13148-201ENSMUST00000118892 745 ntBASIC18.04■□□□□ 0.48
Nkx2-6P43688 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.04■□□□□ 0.48
Nkx2-6P43688 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Nkx2-6P43688 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Nkx2-6P43688 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Nkx2-6P43688 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Nkx2-6P43688 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-6P43688 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Nkx2-6P43688 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.04■□□□□ 0.48
Nkx2-6P43688 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-6P43688 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-6P43688 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-6P43688 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx2-6P43688 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-6P43688 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-6P43688 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Nkx2-6P43688 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-6P43688 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-6P43688 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-6P43688 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-6P43688 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-6P43688 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-6P43688 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-6P43688 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.03■□□□□ 0.48
Nkx2-6P43688 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.03■□□□□ 0.48
Nkx2-6P43688 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-6P43688 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-6P43688 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx2-6P43688 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.02■□□□□ 0.48
Nkx2-6P43688 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.02■□□□□ 0.48
Nkx2-6P43688 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms