Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Msh2P43247 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh2P43247 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Msh2P43247 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Msh2P43247 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.65■□□□□ 0.74
Msh2P43247 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh2P43247 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
Msh2P43247 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh2P43247 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh2P43247 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh2P43247 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh2P43247 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh2P43247 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Msh2P43247 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Msh2P43247 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.74
Msh2P43247 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Msh2P43247 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.64■□□□□ 0.73
Msh2P43247 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Msh2P43247 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.64■□□□□ 0.73
Msh2P43247 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.64■□□□□ 0.73
Msh2P43247 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Msh2P43247 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Msh2P43247 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Msh2P43247 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Msh2P43247 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.64■□□□□ 0.73
Msh2P43247 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Msh2P43247 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Msh2P43247 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh2P43247 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Msh2P43247 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh2P43247 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh2P43247 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh2P43247 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh2P43247 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Msh2P43247 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Msh2P43247 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Msh2P43247 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.63■□□□□ 0.73
Msh2P43247 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.63■□□□□ 0.73
Msh2P43247 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh2P43247 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh2P43247 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.63■□□□□ 0.73
Msh2P43247 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Msh2P43247 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Msh2P43247 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh2P43247 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh2P43247 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.62■□□□□ 0.73
Msh2P43247 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Msh2P43247 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.62■□□□□ 0.73
Msh2P43247 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh2P43247 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh2P43247 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Msh2P43247 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh2P43247 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh2P43247 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.61■□□□□ 0.73
Msh2P43247 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Msh2P43247 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh2P43247 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Msh2P43247 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.61■□□□□ 0.73
Msh2P43247 Gm45417-201ENSMUST00000209533 758 ntBASIC19.61■□□□□ 0.73
Msh2P43247 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh2P43247 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Msh2P43247 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Msh2P43247 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.61■□□□□ 0.73
Msh2P43247 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh2P43247 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh2P43247 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh2P43247 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh2P43247 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.61■□□□□ 0.73
Msh2P43247 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Msh2P43247 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.6■□□□□ 0.73
Msh2P43247 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Msh2P43247 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Msh2P43247 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Msh2P43247 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Msh2P43247 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Msh2P43247 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.6■□□□□ 0.73
Msh2P43247 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Msh2P43247 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Msh2P43247 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Msh2P43247 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Msh2P43247 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Msh2P43247 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Msh2P43247 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh2P43247 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh2P43247 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh2P43247 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Msh2P43247 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh2P43247 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.59■□□□□ 0.73
Msh2P43247 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh2P43247 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh2P43247 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Msh2P43247 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Msh2P43247 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh2P43247 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.59■□□□□ 0.73
Msh2P43247 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Msh2P43247 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Msh2P43247 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Msh2P43247 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Msh2P43247 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.58■□□□□ 0.73
Msh2P43247 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms