Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HttP42859 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HttP42859 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HttP42859 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HttP42859 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
HttP42859 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HttP42859 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.83■□□□□ 0.92
HttP42859 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.83■□□□□ 0.92
HttP42859 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
HttP42859 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HttP42859 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HttP42859 Gm13559-201ENSMUST00000120476 863 ntBASIC20.82■□□□□ 0.92
HttP42859 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
HttP42859 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HttP42859 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HttP42859 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HttP42859 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
HttP42859 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.82■□□□□ 0.92
HttP42859 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.82■□□□□ 0.92
HttP42859 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HttP42859 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HttP42859 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HttP42859 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.82■□□□□ 0.92
HttP42859 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HttP42859 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HttP42859 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.81■□□□□ 0.92
HttP42859 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC20.81■□□□□ 0.92
HttP42859 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HttP42859 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HttP42859 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HttP42859 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HttP42859 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
HttP42859 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
HttP42859 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.8■□□□□ 0.92
HttP42859 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HttP42859 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.8■□□□□ 0.92
HttP42859 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HttP42859 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
HttP42859 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.8■□□□□ 0.92
HttP42859 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.8■□□□□ 0.92
HttP42859 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HttP42859 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HttP42859 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HttP42859 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HttP42859 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HttP42859 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
HttP42859 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HttP42859 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
HttP42859 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HttP42859 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HttP42859 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HttP42859 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.79■□□□□ 0.92
HttP42859 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HttP42859 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.79■□□□□ 0.92
HttP42859 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HttP42859 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HttP42859 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
HttP42859 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HttP42859 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HttP42859 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HttP42859 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
HttP42859 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
HttP42859 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
HttP42859 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HttP42859 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HttP42859 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HttP42859 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
HttP42859 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HttP42859 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HttP42859 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC20.76■□□□□ 0.91
HttP42859 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.76■□□□□ 0.91
HttP42859 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HttP42859 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
HttP42859 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
HttP42859 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HttP42859 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HttP42859 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HttP42859 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
HttP42859 Gm18101-201ENSMUST00000215769 548 ntBASIC20.76■□□□□ 0.91
HttP42859 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.76■□□□□ 0.91
HttP42859 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.75■□□□□ 0.91
HttP42859 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HttP42859 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HttP42859 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HttP42859 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
HttP42859 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
HttP42859 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.75■□□□□ 0.91
HttP42859 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HttP42859 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HttP42859 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HttP42859 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HttP42859 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HttP42859 Gm17971-201ENSMUST00000190239 806 ntBASIC20.75■□□□□ 0.91
HttP42859 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HttP42859 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HttP42859 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.74■□□□□ 0.91
HttP42859 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HttP42859 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HttP42859 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HttP42859 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms