Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Abca1P41233 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Abca1P41233 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.81■□□□□ 0.12
Abca1P41233 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.81■□□□□ 0.12
Abca1P41233 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Abca1P41233 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abca1P41233 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.8■□□□□ 0.12
Abca1P41233 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.8■□□□□ 0.12
Abca1P41233 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Abca1P41233 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.8■□□□□ 0.12
Abca1P41233 Mir6236-201ENSMUST00000184437 123 ntBASIC15.8■□□□□ 0.12
Abca1P41233 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Abca1P41233 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abca1P41233 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abca1P41233 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abca1P41233 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Abca1P41233 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abca1P41233 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abca1P41233 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abca1P41233 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abca1P41233 Gm13146-201ENSMUST00000118508 780 ntBASIC15.8■□□□□ 0.12
Abca1P41233 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abca1P41233 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abca1P41233 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abca1P41233 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abca1P41233 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abca1P41233 Gm13168-201ENSMUST00000121771 632 ntBASIC15.79■□□□□ 0.12
Abca1P41233 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Abca1P41233 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Abca1P41233 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.79■□□□□ 0.12
Abca1P41233 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abca1P41233 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abca1P41233 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abca1P41233 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Abca1P41233 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Abca1P41233 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abca1P41233 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Abca1P41233 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Abca1P41233 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abca1P41233 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abca1P41233 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Abca1P41233 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.78■□□□□ 0.12
Abca1P41233 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Abca1P41233 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.78■□□□□ 0.12
Abca1P41233 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Abca1P41233 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Abca1P41233 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Abca1P41233 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Abca1P41233 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Abca1P41233 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Abca1P41233 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.78■□□□□ 0.12
Abca1P41233 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Abca1P41233 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Abca1P41233 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Abca1P41233 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Abca1P41233 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Abca1P41233 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Abca1P41233 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Abca1P41233 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Abca1P41233 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Abca1P41233 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.77■□□□□ 0.12
Abca1P41233 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.77■□□□□ 0.12
Abca1P41233 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Abca1P41233 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Abca1P41233 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
Abca1P41233 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Abca1P41233 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.77■□□□□ 0.11
Abca1P41233 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Abca1P41233 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Abca1P41233 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Abca1P41233 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Abca1P41233 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Abca1P41233 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Abca1P41233 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Abca1P41233 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Abca1P41233 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Abca1P41233 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Abca1P41233 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Abca1P41233 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.75■□□□□ 0.11
Abca1P41233 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Abca1P41233 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Abca1P41233 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Abca1P41233 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Abca1P41233 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.75■□□□□ 0.11
Abca1P41233 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Abca1P41233 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Abca1P41233 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Abca1P41233 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Abca1P41233 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.74■□□□□ 0.11
Abca1P41233 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Abca1P41233 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Abca1P41233 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Abca1P41233 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Abca1P41233 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Abca1P41233 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15.74■□□□□ 0.11
Abca1P41233 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Abca1P41233 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Abca1P41233 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Abca1P41233 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.74■□□□□ 0.11
Abca1P41233 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms