Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sox6P40645 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.89■□□□□ 0.45
Sox6P40645 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sox6P40645 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sox6P40645 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sox6P40645 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Sox6P40645 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sox6P40645 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sox6P40645 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Sox6P40645 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.88■□□□□ 0.45
Sox6P40645 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sox6P40645 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sox6P40645 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Sox6P40645 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sox6P40645 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sox6P40645 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sox6P40645 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.87■□□□□ 0.45
Sox6P40645 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sox6P40645 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.87■□□□□ 0.45
Sox6P40645 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sox6P40645 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.86■□□□□ 0.45
Sox6P40645 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Sox6P40645 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sox6P40645 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sox6P40645 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sox6P40645 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Sox6P40645 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sox6P40645 Gm12821-201ENSMUST00000120022 600 ntBASIC17.86■□□□□ 0.45
Sox6P40645 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.86■□□□□ 0.45
Sox6P40645 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sox6P40645 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sox6P40645 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Sox6P40645 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sox6P40645 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Sox6P40645 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.86■□□□□ 0.45
Sox6P40645 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Sox6P40645 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sox6P40645 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Sox6P40645 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Sox6P40645 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sox6P40645 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sox6P40645 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Sox6P40645 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sox6P40645 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sox6P40645 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Sox6P40645 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sox6P40645 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sox6P40645 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Sox6P40645 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sox6P40645 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.85■□□□□ 0.45
Sox6P40645 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox6P40645 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
Sox6P40645 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox6P40645 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sox6P40645 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox6P40645 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Sox6P40645 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox6P40645 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox6P40645 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox6P40645 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sox6P40645 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox6P40645 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.84■□□□□ 0.45
Sox6P40645 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox6P40645 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox6P40645 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox6P40645 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox6P40645 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox6P40645 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.84■□□□□ 0.45
Sox6P40645 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Sox6P40645 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Sox6P40645 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sox6P40645 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sox6P40645 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Sox6P40645 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.83■□□□□ 0.44
Sox6P40645 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sox6P40645 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sox6P40645 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sox6P40645 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sox6P40645 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sox6P40645 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox6P40645 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox6P40645 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox6P40645 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox6P40645 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sox6P40645 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.82■□□□□ 0.44
Sox6P40645 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.82■□□□□ 0.44
Sox6P40645 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.82■□□□□ 0.44
Sox6P40645 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox6P40645 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox6P40645 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.82■□□□□ 0.44
Sox6P40645 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox6P40645 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sox6P40645 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox6P40645 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sox6P40645 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sox6P40645 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox6P40645 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox6P40645 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox6P40645 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sox6P40645 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms