Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.1■□□□□ 0.81
Rfc1P35601 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfc1P35601 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Rfc1P35601 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rfc1P35601 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.1■□□□□ 0.81
Rfc1P35601 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rfc1P35601 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfc1P35601 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfc1P35601 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfc1P35601 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfc1P35601 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfc1P35601 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfc1P35601 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rfc1P35601 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfc1P35601 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Rfc1P35601 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfc1P35601 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfc1P35601 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rfc1P35601 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Rfc1P35601 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rfc1P35601 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfc1P35601 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfc1P35601 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rfc1P35601 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rfc1P35601 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.08■□□□□ 0.81
Rfc1P35601 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rfc1P35601 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Rfc1P35601 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rfc1P35601 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rfc1P35601 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rfc1P35601 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.08■□□□□ 0.8
Rfc1P35601 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Rfc1P35601 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfc1P35601 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfc1P35601 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.07■□□□□ 0.8
Rfc1P35601 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfc1P35601 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfc1P35601 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfc1P35601 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfc1P35601 Gm5812-201ENSMUST00000061073 957 ntBASIC20.07■□□□□ 0.8
Rfc1P35601 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfc1P35601 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfc1P35601 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rfc1P35601 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfc1P35601 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfc1P35601 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfc1P35601 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.06■□□□□ 0.8
Rfc1P35601 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rfc1P35601 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Rfc1P35601 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.06■□□□□ 0.8
Rfc1P35601 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.06■□□□□ 0.8
Rfc1P35601 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rfc1P35601 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rfc1P35601 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rfc1P35601 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rfc1P35601 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Rfc1P35601 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.05■□□□□ 0.8
Rfc1P35601 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.05■□□□□ 0.8
Rfc1P35601 BC021767-201ENSMUST00000126387 1716 ntBASIC20.05■□□□□ 0.8
Rfc1P35601 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Rfc1P35601 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rfc1P35601 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.05■□□□□ 0.8
Rfc1P35601 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.05■□□□□ 0.8
Rfc1P35601 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rfc1P35601 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rfc1P35601 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rfc1P35601 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rfc1P35601 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfc1P35601 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfc1P35601 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfc1P35601 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rfc1P35601 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfc1P35601 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.04■□□□□ 0.8
Rfc1P35601 Gm40881-201ENSMUST00000223397 166 ntBASIC20.04■□□□□ 0.8
Rfc1P35601 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Rfc1P35601 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfc1P35601 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfc1P35601 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfc1P35601 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfc1P35601 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfc1P35601 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Rfc1P35601 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfc1P35601 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.03■□□□□ 0.8
Rfc1P35601 Gm15820-201ENSMUST00000201566 728 ntBASIC20.03■□□□□ 0.8
Rfc1P35601 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfc1P35601 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfc1P35601 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rfc1P35601 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfc1P35601 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfc1P35601 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Rfc1P35601 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rfc1P35601 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfc1P35601 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rfc1P35601 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfc1P35601 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfc1P35601 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfc1P35601 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfc1P35601 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.02■□□□□ 0.8
Rfc1P35601 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Rfc1P35601 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms