Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.65■□□□□ 0.74
Nfkb1P25799 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nfkb1P25799 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nfkb1P25799 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nfkb1P25799 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nfkb1P25799 Gm7860-201ENSMUST00000121190 879 ntBASIC19.65■□□□□ 0.74
Nfkb1P25799 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.65■□□□□ 0.74
Nfkb1P25799 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nfkb1P25799 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nfkb1P25799 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Nfkb1P25799 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nfkb1P25799 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nfkb1P25799 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nfkb1P25799 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Nfkb1P25799 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.65■□□□□ 0.74
Nfkb1P25799 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nfkb1P25799 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nfkb1P25799 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nfkb1P25799 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nfkb1P25799 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Nfkb1P25799 Gm13534-201ENSMUST00000121169 513 ntBASIC19.64■□□□□ 0.73
Nfkb1P25799 Gm6420-201ENSMUST00000193885 723 ntBASIC19.64■□□□□ 0.73
Nfkb1P25799 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nfkb1P25799 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nfkb1P25799 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nfkb1P25799 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nfkb1P25799 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.63■□□□□ 0.73
Nfkb1P25799 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.63■□□□□ 0.73
Nfkb1P25799 Mir5133-201ENSMUST00000174955 77 ntBASIC19.63■□□□□ 0.73
Nfkb1P25799 Gm27011-201ENSMUST00000182352 972 ntBASIC19.63■□□□□ 0.73
Nfkb1P25799 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nfkb1P25799 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nfkb1P25799 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Nfkb1P25799 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nfkb1P25799 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Nfkb1P25799 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nfkb1P25799 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.62■□□□□ 0.73
Nfkb1P25799 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nfkb1P25799 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nfkb1P25799 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nfkb1P25799 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Nfkb1P25799 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nfkb1P25799 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nfkb1P25799 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nfkb1P25799 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.61■□□□□ 0.73
Nfkb1P25799 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nfkb1P25799 Nespas-201ENSMUST00000143738 1083 ntBASIC19.61■□□□□ 0.73
Nfkb1P25799 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.61■□□□□ 0.73
Nfkb1P25799 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nfkb1P25799 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Nfkb1P25799 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nfkb1P25799 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nfkb1P25799 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.61■□□□□ 0.73
Nfkb1P25799 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nfkb1P25799 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nfkb1P25799 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nfkb1P25799 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nfkb1P25799 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Nfkb1P25799 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.6■□□□□ 0.73
Nfkb1P25799 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nfkb1P25799 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.6■□□□□ 0.73
Nfkb1P25799 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.6■□□□□ 0.73
Nfkb1P25799 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nfkb1P25799 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nfkb1P25799 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nfkb1P25799 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.59■□□□□ 0.73
Nfkb1P25799 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nfkb1P25799 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
Nfkb1P25799 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nfkb1P25799 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.59■□□□□ 0.73
Nfkb1P25799 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Nfkb1P25799 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.59■□□□□ 0.73
Nfkb1P25799 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.59■□□□□ 0.73
Nfkb1P25799 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nfkb1P25799 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nfkb1P25799 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nfkb1P25799 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Nfkb1P25799 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Nfkb1P25799 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nfkb1P25799 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nfkb1P25799 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nfkb1P25799 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nfkb1P25799 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nfkb1P25799 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nfkb1P25799 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.58■□□□□ 0.73
Nfkb1P25799 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nfkb1P25799 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Nfkb1P25799 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nfkb1P25799 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.58■□□□□ 0.72
Nfkb1P25799 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nfkb1P25799 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nfkb1P25799 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.57■□□□□ 0.72
Nfkb1P25799 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nfkb1P25799 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nfkb1P25799 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nfkb1P25799 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.57■□□□□ 0.72
Nfkb1P25799 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.57■□□□□ 0.72
Nfkb1P25799 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Nfkb1P25799 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nfkb1P25799 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms