Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf1bP25119 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Tnfrsf1bP25119 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
Tnfrsf1bP25119 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf1bP25119 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf1bP25119 Gm42778-201ENSMUST00000199644 553 ntBASIC17.7■□□□□ 0.42
Tnfrsf1bP25119 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf1bP25119 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf1bP25119 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf1bP25119 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.7■□□□□ 0.42
Tnfrsf1bP25119 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf1bP25119 Reep4-203ENSMUST00000226563 1444 ntBASIC17.7■□□□□ 0.42
Tnfrsf1bP25119 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf1bP25119 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf1bP25119 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf1bP25119 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.69■□□□□ 0.42
Tnfrsf1bP25119 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Tnfrsf1bP25119 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf1bP25119 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf1bP25119 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf1bP25119 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.69■□□□□ 0.42
Tnfrsf1bP25119 Gm8495-201ENSMUST00000188740 694 ntBASIC17.69■□□□□ 0.42
Tnfrsf1bP25119 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf1bP25119 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Tnfrsf1bP25119 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf1bP25119 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf1bP25119 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf1bP25119 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf1bP25119 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf1bP25119 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf1bP25119 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf1bP25119 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf1bP25119 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf1bP25119 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf1bP25119 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Tnfrsf1bP25119 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.68■□□□□ 0.42
Tnfrsf1bP25119 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf1bP25119 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf1bP25119 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf1bP25119 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.68■□□□□ 0.42
Tnfrsf1bP25119 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf1bP25119 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf1bP25119 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Tnfrsf1bP25119 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.68■□□□□ 0.42
Tnfrsf1bP25119 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf1bP25119 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf1bP25119 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf1bP25119 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf1bP25119 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf1bP25119 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf1bP25119 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.67■□□□□ 0.42
Tnfrsf1bP25119 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf1bP25119 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf1bP25119 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf1bP25119 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.67■□□□□ 0.42
Tnfrsf1bP25119 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf1bP25119 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf1bP25119 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf1bP25119 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf1bP25119 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.66■□□□□ 0.42
Tnfrsf1bP25119 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.66■□□□□ 0.42
Tnfrsf1bP25119 Gm42642-201ENSMUST00000200683 355 ntBASIC17.66■□□□□ 0.42
Tnfrsf1bP25119 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Tnfrsf1bP25119 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf1bP25119 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Tnfrsf1bP25119 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf1bP25119 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf1bP25119 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf1bP25119 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf1bP25119 Gm7860-201ENSMUST00000121190 879 ntBASIC17.65■□□□□ 0.42
Tnfrsf1bP25119 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf1bP25119 Gm38205-201ENSMUST00000192243 258 ntBASIC17.65■□□□□ 0.42
Tnfrsf1bP25119 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Tnfrsf1bP25119 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.65■□□□□ 0.42
Tnfrsf1bP25119 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.65■□□□□ 0.42
Tnfrsf1bP25119 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.65■□□□□ 0.42
Tnfrsf1bP25119 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf1bP25119 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf1bP25119 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Tnfrsf1bP25119 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
Tnfrsf1bP25119 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf1bP25119 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf1bP25119 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf1bP25119 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.64■□□□□ 0.41
Tnfrsf1bP25119 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Tnfrsf1bP25119 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf1bP25119 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf1bP25119 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf1bP25119 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf1bP25119 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf1bP25119 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.64■□□□□ 0.41
Tnfrsf1bP25119 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.64■□□□□ 0.41
Tnfrsf1bP25119 Notumos-201ENSMUST00000151998 2659 ntBASIC17.64■□□□□ 0.41
Tnfrsf1bP25119 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Tnfrsf1bP25119 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Tnfrsf1bP25119 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Tnfrsf1bP25119 Gm13234-201ENSMUST00000120010 747 ntBASIC17.63■□□□□ 0.41
Tnfrsf1bP25119 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf1bP25119 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf1bP25119 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms