Protein–RNA interactions for Protein: P22605

Rarb, Retinoic acid receptor beta, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RarbP22605 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.23■□□□□ 0.99
RarbP22605 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RarbP22605 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RarbP22605 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RarbP22605 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RarbP22605 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RarbP22605 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
RarbP22605 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RarbP22605 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RarbP22605 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
RarbP22605 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RarbP22605 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.21■□□□□ 0.99
RarbP22605 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RarbP22605 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RarbP22605 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RarbP22605 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RarbP22605 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RarbP22605 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RarbP22605 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RarbP22605 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.21■□□□□ 0.99
RarbP22605 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
RarbP22605 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RarbP22605 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RarbP22605 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.21■□□□□ 0.99
RarbP22605 Gm22325-201ENSMUST00000158904 308 ntBASIC21.21■□□□□ 0.99
RarbP22605 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.21■□□□□ 0.99
RarbP22605 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RarbP22605 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RarbP22605 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RarbP22605 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RarbP22605 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RarbP22605 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RarbP22605 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.2■□□□□ 0.98
RarbP22605 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RarbP22605 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RarbP22605 Mir6982-201ENSMUST00000184354 68 ntBASIC21.2■□□□□ 0.98
RarbP22605 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RarbP22605 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
RarbP22605 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.2■□□□□ 0.98
RarbP22605 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
RarbP22605 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
RarbP22605 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
RarbP22605 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RarbP22605 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RarbP22605 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RarbP22605 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RarbP22605 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RarbP22605 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RarbP22605 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RarbP22605 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.19■□□□□ 0.98
RarbP22605 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RarbP22605 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
RarbP22605 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RarbP22605 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RarbP22605 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RarbP22605 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
RarbP22605 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RarbP22605 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RarbP22605 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RarbP22605 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RarbP22605 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RarbP22605 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RarbP22605 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
RarbP22605 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
RarbP22605 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RarbP22605 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RarbP22605 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RarbP22605 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.18■□□□□ 0.98
RarbP22605 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.17■□□□□ 0.98
RarbP22605 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RarbP22605 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RarbP22605 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RarbP22605 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RarbP22605 AC158538.1-201ENSMUST00000225870 294 ntBASIC21.17■□□□□ 0.98
RarbP22605 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RarbP22605 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RarbP22605 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RarbP22605 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RarbP22605 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.16■□□□□ 0.98
RarbP22605 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RarbP22605 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RarbP22605 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
RarbP22605 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RarbP22605 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RarbP22605 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RarbP22605 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RarbP22605 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
RarbP22605 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RarbP22605 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RarbP22605 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RarbP22605 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RarbP22605 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RarbP22605 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RarbP22605 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RarbP22605 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RarbP22605 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.15■□□□□ 0.98
RarbP22605 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RarbP22605 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RarbP22605 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RarbP22605 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms