Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Tnfrsf9P20334 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tnfrsf9P20334 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tnfrsf9P20334 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Tnfrsf9P20334 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf9P20334 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.43■□□□□ 0.06
Tnfrsf9P20334 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf9P20334 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf9P20334 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf9P20334 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf9P20334 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf9P20334 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.43■□□□□ 0.06
Tnfrsf9P20334 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf9P20334 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.43■□□□□ 0.06
Tnfrsf9P20334 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf9P20334 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf9P20334 Gm5913-201ENSMUST00000119397 1399 ntBASIC15.43■□□□□ 0.06
Tnfrsf9P20334 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf9P20334 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf9P20334 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf9P20334 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf9P20334 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC15.43■□□□□ 0.06
Tnfrsf9P20334 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf9P20334 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf9P20334 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf9P20334 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf9P20334 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf9P20334 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf9P20334 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf9P20334 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC15.42■□□□□ 0.06
Tnfrsf9P20334 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.42■□□□□ 0.06
Tnfrsf9P20334 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf9P20334 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf9P20334 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf9P20334 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.42■□□□□ 0.06
Tnfrsf9P20334 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
Tnfrsf9P20334 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf9P20334 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf9P20334 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC15.42■□□□□ 0.06
Tnfrsf9P20334 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf9P20334 Gm10252-201ENSMUST00000209541 832 ntBASIC15.42■□□□□ 0.06
Tnfrsf9P20334 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf9P20334 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Tnfrsf9P20334 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf9P20334 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf9P20334 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf9P20334 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf9P20334 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf9P20334 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Tnfrsf9P20334 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf9P20334 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf9P20334 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf9P20334 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf9P20334 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf9P20334 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf9P20334 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Tnfrsf9P20334 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.41■□□□□ 0.06
Tnfrsf9P20334 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Tnfrsf9P20334 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.41■□□□□ 0.06
Tnfrsf9P20334 Gm7514-201ENSMUST00000209475 934 ntBASIC15.41■□□□□ 0.06
Tnfrsf9P20334 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.41■□□□□ 0.06
Tnfrsf9P20334 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.41■□□□□ 0.06
Tnfrsf9P20334 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf9P20334 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf9P20334 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf9P20334 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf9P20334 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf9P20334 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf9P20334 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf9P20334 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf9P20334 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf9P20334 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Tnfrsf9P20334 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf9P20334 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Tnfrsf9P20334 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Tnfrsf9P20334 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf9P20334 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf9P20334 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf9P20334 Gm22240-201ENSMUST00000175225 82 ntBASIC15.4■□□□□ 0.06
Tnfrsf9P20334 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.4■□□□□ 0.06
Tnfrsf9P20334 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf9P20334 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Tnfrsf9P20334 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf9P20334 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf9P20334 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf9P20334 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Tnfrsf9P20334 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Tnfrsf9P20334 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.39■□□□□ 0.05
Tnfrsf9P20334 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf9P20334 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf9P20334 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Tnfrsf9P20334 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.39■□□□□ 0.05
Tnfrsf9P20334 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf9P20334 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf9P20334 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf9P20334 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.39■□□□□ 0.05
Tnfrsf9P20334 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf9P20334 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf9P20334 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf9P20334 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms