Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmga1P17095 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hmga1P17095 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmga1P17095 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hmga1P17095 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hmga1P17095 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmga1P17095 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Hmga1P17095 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmga1P17095 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmga1P17095 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmga1P17095 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Hmga1P17095 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmga1P17095 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Hmga1P17095 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmga1P17095 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Hmga1P17095 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.65■□□□□ 0.74
Hmga1P17095 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmga1P17095 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmga1P17095 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hmga1P17095 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmga1P17095 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmga1P17095 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmga1P17095 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Hmga1P17095 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmga1P17095 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hmga1P17095 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmga1P17095 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmga1P17095 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hmga1P17095 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmga1P17095 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hmga1P17095 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.64■□□□□ 0.73
Hmga1P17095 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Hmga1P17095 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmga1P17095 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmga1P17095 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmga1P17095 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmga1P17095 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hmga1P17095 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Hmga1P17095 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmga1P17095 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Hmga1P17095 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmga1P17095 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmga1P17095 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hmga1P17095 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmga1P17095 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hmga1P17095 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmga1P17095 Gm12441-201ENSMUST00000121806 588 ntBASIC19.63■□□□□ 0.73
Hmga1P17095 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmga1P17095 Gm6211-202ENSMUST00000167849 925 ntBASIC19.63■□□□□ 0.73
Hmga1P17095 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.63■□□□□ 0.73
Hmga1P17095 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmga1P17095 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmga1P17095 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmga1P17095 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Hmga1P17095 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Hmga1P17095 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmga1P17095 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hmga1P17095 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmga1P17095 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmga1P17095 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmga1P17095 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmga1P17095 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.62■□□□□ 0.73
Hmga1P17095 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Hmga1P17095 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmga1P17095 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmga1P17095 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Hmga1P17095 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.61■□□□□ 0.73
Hmga1P17095 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmga1P17095 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmga1P17095 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmga1P17095 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hmga1P17095 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.61■□□□□ 0.73
Hmga1P17095 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.61■□□□□ 0.73
Hmga1P17095 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.61■□□□□ 0.73
Hmga1P17095 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.61■□□□□ 0.73
Hmga1P17095 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmga1P17095 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmga1P17095 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmga1P17095 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hmga1P17095 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmga1P17095 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmga1P17095 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmga1P17095 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hmga1P17095 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
Hmga1P17095 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hmga1P17095 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.6■□□□□ 0.73
Hmga1P17095 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.6■□□□□ 0.73
Hmga1P17095 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.6■□□□□ 0.73
Hmga1P17095 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Hmga1P17095 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmga1P17095 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Hmga1P17095 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Hmga1P17095 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmga1P17095 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
Hmga1P17095 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmga1P17095 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hmga1P17095 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hmga1P17095 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hmga1P17095 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmga1P17095 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms