Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.64■■□□□ 1.22
Col1a1P11087 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC22.64■■□□□ 1.21
Col1a1P11087 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col1a1P11087 Krtap5-1-202ENSMUST00000188274 742 ntBASIC22.64■■□□□ 1.21
Col1a1P11087 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
Col1a1P11087 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col1a1P11087 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
Col1a1P11087 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col1a1P11087 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col1a1P11087 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Col1a1P11087 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col1a1P11087 AC154649.1-201ENSMUST00000227392 384 ntBASIC22.63■■□□□ 1.21
Col1a1P11087 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Col1a1P11087 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col1a1P11087 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col1a1P11087 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col1a1P11087 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col1a1P11087 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC22.62■■□□□ 1.21
Col1a1P11087 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Col1a1P11087 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col1a1P11087 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Col1a1P11087 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Col1a1P11087 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Col1a1P11087 Gm10698-201ENSMUST00000182663 604 ntBASIC22.61■■□□□ 1.21
Col1a1P11087 Gm44549-201ENSMUST00000208351 577 ntBASIC22.61■■□□□ 1.21
Col1a1P11087 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC22.61■■□□□ 1.21
Col1a1P11087 Gm6802-201ENSMUST00000167843 1983 ntBASIC22.61■■□□□ 1.21
Col1a1P11087 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col1a1P11087 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Col1a1P11087 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col1a1P11087 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col1a1P11087 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col1a1P11087 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col1a1P11087 Gm11249-201ENSMUST00000117071 859 ntBASIC22.6■■□□□ 1.21
Col1a1P11087 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC22.6■■□□□ 1.21
Col1a1P11087 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Col1a1P11087 AC153881.1-201ENSMUST00000214448 284 ntBASIC22.6■■□□□ 1.21
Col1a1P11087 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col1a1P11087 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Col1a1P11087 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Col1a1P11087 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col1a1P11087 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col1a1P11087 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col1a1P11087 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Col1a1P11087 AC130671.1-201ENSMUST00000227384 1237 ntBASIC22.6■■□□□ 1.21
Col1a1P11087 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
Col1a1P11087 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col1a1P11087 Gm13042-201ENSMUST00000119244 1955 ntBASIC22.59■■□□□ 1.21
Col1a1P11087 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col1a1P11087 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col1a1P11087 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Col1a1P11087 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
Col1a1P11087 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC22.59■■□□□ 1.21
Col1a1P11087 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Col1a1P11087 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC22.59■■□□□ 1.21
Col1a1P11087 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col1a1P11087 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col1a1P11087 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Col1a1P11087 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC22.58■■□□□ 1.21
Col1a1P11087 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
Col1a1P11087 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col1a1P11087 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
Col1a1P11087 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Col1a1P11087 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col1a1P11087 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col1a1P11087 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Col1a1P11087 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Col1a1P11087 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Col1a1P11087 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
Col1a1P11087 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.2
Col1a1P11087 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Col1a1P11087 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC22.58■■□□□ 1.2
Col1a1P11087 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Col1a1P11087 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col1a1P11087 AC152827.1-201ENSMUST00000221143 2189 ntBASIC22.57■■□□□ 1.2
Col1a1P11087 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col1a1P11087 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Col1a1P11087 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
Col1a1P11087 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC22.57■■□□□ 1.2
Col1a1P11087 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC22.57■■□□□ 1.2
Col1a1P11087 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col1a1P11087 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Col1a1P11087 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Col1a1P11087 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Col1a1P11087 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Col1a1P11087 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC22.55■■□□□ 1.2
Col1a1P11087 Gm37055-201ENSMUST00000191866 133 ntBASIC22.55■■□□□ 1.2
Col1a1P11087 AL672049.1-201ENSMUST00000197943 91 ntBASIC22.55■■□□□ 1.2
Col1a1P11087 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col1a1P11087 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col1a1P11087 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Col1a1P11087 Nrn1-203ENSMUST00000223611 1443 ntBASIC22.55■■□□□ 1.2
Col1a1P11087 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col1a1P11087 Gm11643-201ENSMUST00000119578 864 ntBASIC22.54■■□□□ 1.2
Col1a1P11087 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Col1a1P11087 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC22.54■■□□□ 1.2
Col1a1P11087 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC22.54■■□□□ 1.2
Col1a1P11087 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC22.54■■□□□ 1.2
Col1a1P11087 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col1a1P11087 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms