Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Hoxa9P09631 Nespas-201ENSMUST00000143738 1083 ntBASIC19.27■□□□□ 0.68
Hoxa9P09631 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hoxa9P09631 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hoxa9P09631 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hoxa9P09631 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Hoxa9P09631 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Hoxa9P09631 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxa9P09631 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.26■□□□□ 0.67
Hoxa9P09631 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxa9P09631 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxa9P09631 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxa9P09631 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxa9P09631 Gm13148-201ENSMUST00000118892 745 ntBASIC19.26■□□□□ 0.67
Hoxa9P09631 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxa9P09631 Gm6420-201ENSMUST00000193885 723 ntBASIC19.26■□□□□ 0.67
Hoxa9P09631 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Hoxa9P09631 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Hoxa9P09631 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxa9P09631 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
Hoxa9P09631 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Hoxa9P09631 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.25■□□□□ 0.67
Hoxa9P09631 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxa9P09631 Gm20760-201ENSMUST00000179197 648 ntBASIC19.25■□□□□ 0.67
Hoxa9P09631 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxa9P09631 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.25■□□□□ 0.67
Hoxa9P09631 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Hoxa9P09631 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Hoxa9P09631 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Hoxa9P09631 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.25■□□□□ 0.67
Hoxa9P09631 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxa9P09631 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.24■□□□□ 0.67
Hoxa9P09631 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxa9P09631 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxa9P09631 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Hoxa9P09631 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxa9P09631 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxa9P09631 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Hoxa9P09631 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxa9P09631 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Hoxa9P09631 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.24■□□□□ 0.67
Hoxa9P09631 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxa9P09631 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.24■□□□□ 0.67
Hoxa9P09631 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxa9P09631 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxa9P09631 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxa9P09631 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxa9P09631 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxa9P09631 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxa9P09631 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxa9P09631 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxa9P09631 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.23■□□□□ 0.67
Hoxa9P09631 Gm10653-202ENSMUST00000139570 835 ntBASIC19.23■□□□□ 0.67
Hoxa9P09631 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxa9P09631 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxa9P09631 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxa9P09631 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxa9P09631 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxa9P09631 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxa9P09631 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxa9P09631 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxa9P09631 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxa9P09631 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.22■□□□□ 0.67
Hoxa9P09631 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.22■□□□□ 0.67
Hoxa9P09631 Gm5408-201ENSMUST00000197998 747 ntBASIC19.22■□□□□ 0.67
Hoxa9P09631 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.22■□□□□ 0.67
Hoxa9P09631 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxa9P09631 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxa9P09631 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxa9P09631 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxa9P09631 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxa9P09631 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxa9P09631 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.21■□□□□ 0.67
Hoxa9P09631 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxa9P09631 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxa9P09631 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxa9P09631 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.21■□□□□ 0.67
Hoxa9P09631 Gm6211-202ENSMUST00000167849 925 ntBASIC19.21■□□□□ 0.67
Hoxa9P09631 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxa9P09631 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxa9P09631 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxa9P09631 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxa9P09631 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxa9P09631 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxa9P09631 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Hoxa9P09631 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Hoxa9P09631 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxa9P09631 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.2■□□□□ 0.66
Hoxa9P09631 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxa9P09631 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxa9P09631 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxa9P09631 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.2■□□□□ 0.66
Hoxa9P09631 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxa9P09631 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Hoxa9P09631 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxa9P09631 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxa9P09631 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxa9P09631 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Hoxa9P09631 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxa9P09631 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms