Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxd3P09027 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxd3P09027 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxd3P09027 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxd3P09027 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxd3P09027 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxd3P09027 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxd3P09027 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxd3P09027 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxd3P09027 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxd3P09027 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxd3P09027 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxd3P09027 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.82□□□□□ -0.04
Hoxd3P09027 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxd3P09027 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxd3P09027 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxd3P09027 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxd3P09027 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxd3P09027 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Hoxd3P09027 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxd3P09027 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxd3P09027 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Hoxd3P09027 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxd3P09027 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxd3P09027 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.81□□□□□ -0.04
Hoxd3P09027 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxd3P09027 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxd3P09027 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Hoxd3P09027 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxd3P09027 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxd3P09027 Gm38205-201ENSMUST00000192243 258 ntBASIC14.81□□□□□ -0.04
Hoxd3P09027 Gm7514-201ENSMUST00000209475 934 ntBASIC14.81□□□□□ -0.04
Hoxd3P09027 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxd3P09027 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.81□□□□□ -0.04
Hoxd3P09027 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxd3P09027 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxd3P09027 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxd3P09027 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxd3P09027 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Hoxd3P09027 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxd3P09027 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxd3P09027 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxd3P09027 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxd3P09027 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxd3P09027 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxd3P09027 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.8□□□□□ -0.04
Hoxd3P09027 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Hoxd3P09027 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.8□□□□□ -0.04
Hoxd3P09027 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxd3P09027 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxd3P09027 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Hoxd3P09027 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxd3P09027 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Hoxd3P09027 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxd3P09027 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Hoxd3P09027 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxd3P09027 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Hoxd3P09027 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Hoxd3P09027 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.79□□□□□ -0.04
Hoxd3P09027 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxd3P09027 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxd3P09027 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.79□□□□□ -0.04
Hoxd3P09027 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Hoxd3P09027 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Hoxd3P09027 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxd3P09027 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.78□□□□□ -0.04
Hoxd3P09027 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Hoxd3P09027 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxd3P09027 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.78□□□□□ -0.04
Hoxd3P09027 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Hoxd3P09027 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxd3P09027 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.78□□□□□ -0.04
Hoxd3P09027 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.78□□□□□ -0.04
Hoxd3P09027 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxd3P09027 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxd3P09027 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxd3P09027 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Hoxd3P09027 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Hoxd3P09027 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Hoxd3P09027 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.77□□□□□ -0.04
Hoxd3P09027 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxd3P09027 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxd3P09027 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxd3P09027 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxd3P09027 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Hoxd3P09027 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxd3P09027 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxd3P09027 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxd3P09027 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxd3P09027 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxd3P09027 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Hoxd3P09027 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxd3P09027 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxd3P09027 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxd3P09027 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.77□□□□□ -0.05
Hoxd3P09027 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxd3P09027 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxd3P09027 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxd3P09027 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxd3P09027 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms