Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
P04214 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
P04214 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
P04214 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.23■□□□□ 0.83
P04214 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
P04214 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
P04214 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
P04214 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
P04214 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
P04214 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.23■□□□□ 0.83
P04214 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.23■□□□□ 0.83
P04214 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
P04214 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
P04214 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.23■□□□□ 0.83
P04214 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
P04214 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
P04214 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
P04214 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
P04214 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
P04214 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
P04214 Gm18666-201ENSMUST00000190039 958 ntBASIC20.22■□□□□ 0.83
P04214 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.22■□□□□ 0.83
P04214 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
P04214 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
P04214 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
P04214 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
P04214 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.21■□□□□ 0.83
P04214 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
P04214 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
P04214 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
P04214 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
P04214 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
P04214 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
P04214 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
P04214 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.2■□□□□ 0.82
P04214 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.2■□□□□ 0.82
P04214 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
P04214 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
P04214 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
P04214 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
P04214 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
P04214 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
P04214 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
P04214 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
P04214 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
P04214 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.19■□□□□ 0.82
P04214 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P04214 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P04214 Gm15565-201ENSMUST00000118890 427 ntBASIC20.19■□□□□ 0.82
P04214 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
P04214 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.19■□□□□ 0.82
P04214 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.19■□□□□ 0.82
P04214 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
P04214 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
P04214 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P04214 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
P04214 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
P04214 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
P04214 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
P04214 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
P04214 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.18■□□□□ 0.82
P04214 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
P04214 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
P04214 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
P04214 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
P04214 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
P04214 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
P04214 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.18■□□□□ 0.82
P04214 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
P04214 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P04214 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P04214 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
P04214 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P04214 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P04214 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P04214 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P04214 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P04214 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P04214 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
P04214 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P04214 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
P04214 Gm2399-201ENSMUST00000104944 225 ntBASIC20.16■□□□□ 0.82
P04214 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.16■□□□□ 0.82
P04214 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P04214 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.16■□□□□ 0.82
P04214 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P04214 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
P04214 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
P04214 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.15■□□□□ 0.82
P04214 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
P04214 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
P04214 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
P04214 Gm15378-201ENSMUST00000121894 207 ntBASIC20.15■□□□□ 0.82
P04214 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
P04214 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
P04214 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
P04214 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
P04214 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.15■□□□□ 0.82
P04214 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
P04214 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms