Protein–RNA interactions for Protein: P03888

Mtnd1, NADH-ubiquinone oxidoreductase chain 1, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mtnd1P03888 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mtnd1P03888 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Mtnd1P03888 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mtnd1P03888 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mtnd1P03888 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mtnd1P03888 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mtnd1P03888 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mtnd1P03888 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.57■□□□□ 0.4
Mtnd1P03888 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Mtnd1P03888 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mtnd1P03888 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mtnd1P03888 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mtnd1P03888 Gm14117-201ENSMUST00000122417 843 ntBASIC17.57■□□□□ 0.4
Mtnd1P03888 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.57■□□□□ 0.4
Mtnd1P03888 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mtnd1P03888 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mtnd1P03888 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mtnd1P03888 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mtnd1P03888 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Mtnd1P03888 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Mtnd1P03888 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Mtnd1P03888 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Mtnd1P03888 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Mtnd1P03888 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Mtnd1P03888 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Mtnd1P03888 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mtnd1P03888 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Mtnd1P03888 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mtnd1P03888 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Mtnd1P03888 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.56■□□□□ 0.4
Mtnd1P03888 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mtnd1P03888 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mtnd1P03888 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Mtnd1P03888 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mtnd1P03888 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Mtnd1P03888 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mtnd1P03888 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.55■□□□□ 0.4
Mtnd1P03888 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Mtnd1P03888 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Mtnd1P03888 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mtnd1P03888 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mtnd1P03888 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mtnd1P03888 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mtnd1P03888 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mtnd1P03888 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Mtnd1P03888 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Mtnd1P03888 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Mtnd1P03888 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mtnd1P03888 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Mtnd1P03888 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.54■□□□□ 0.4
Mtnd1P03888 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mtnd1P03888 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.54■□□□□ 0.4
Mtnd1P03888 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mtnd1P03888 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Mtnd1P03888 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.54■□□□□ 0.4
Mtnd1P03888 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mtnd1P03888 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mtnd1P03888 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Mtnd1P03888 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mtnd1P03888 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mtnd1P03888 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mtnd1P03888 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.53■□□□□ 0.4
Mtnd1P03888 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Mtnd1P03888 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mtnd1P03888 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mtnd1P03888 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mtnd1P03888 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mtnd1P03888 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mtnd1P03888 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.53■□□□□ 0.4
Mtnd1P03888 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mtnd1P03888 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Mtnd1P03888 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Mtnd1P03888 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mtnd1P03888 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Mtnd1P03888 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Mtnd1P03888 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.52■□□□□ 0.4
Mtnd1P03888 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mtnd1P03888 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.52■□□□□ 0.4
Mtnd1P03888 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mtnd1P03888 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mtnd1P03888 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mtnd1P03888 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mtnd1P03888 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mtnd1P03888 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mtnd1P03888 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mtnd1P03888 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mtnd1P03888 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.52■□□□□ 0.4
Mtnd1P03888 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.52■□□□□ 0.4
Mtnd1P03888 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mtnd1P03888 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Mtnd1P03888 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.52■□□□□ 0.4
Mtnd1P03888 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mtnd1P03888 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mtnd1P03888 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mtnd1P03888 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mtnd1P03888 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mtnd1P03888 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mtnd1P03888 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mtnd1P03888 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Mtnd1P03888 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms