Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
H3f3cP02301 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
H3f3cP02301 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3f3cP02301 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3f3cP02301 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3f3cP02301 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3f3cP02301 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3f3cP02301 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3f3cP02301 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
H3f3cP02301 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.35■□□□□ 0.21
H3f3cP02301 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
H3f3cP02301 Gm27801-201ENSMUST00000184174 223 ntBASIC16.35■□□□□ 0.21
H3f3cP02301 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
H3f3cP02301 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3f3cP02301 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
H3f3cP02301 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.35■□□□□ 0.21
H3f3cP02301 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3f3cP02301 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
H3f3cP02301 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3f3cP02301 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
H3f3cP02301 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H3f3cP02301 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H3f3cP02301 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
H3f3cP02301 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H3f3cP02301 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
H3f3cP02301 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H3f3cP02301 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
H3f3cP02301 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
H3f3cP02301 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
H3f3cP02301 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.34■□□□□ 0.21
H3f3cP02301 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
H3f3cP02301 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.21
H3f3cP02301 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
H3f3cP02301 Gm15039-201ENSMUST00000118914 875 ntBASIC16.33■□□□□ 0.2
H3f3cP02301 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.33■□□□□ 0.2
H3f3cP02301 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H3f3cP02301 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H3f3cP02301 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H3f3cP02301 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
H3f3cP02301 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
H3f3cP02301 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
H3f3cP02301 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H3f3cP02301 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
H3f3cP02301 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
H3f3cP02301 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H3f3cP02301 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
H3f3cP02301 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H3f3cP02301 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
H3f3cP02301 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H3f3cP02301 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H3f3cP02301 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H3f3cP02301 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H3f3cP02301 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
H3f3cP02301 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
H3f3cP02301 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H3f3cP02301 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H3f3cP02301 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H3f3cP02301 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
H3f3cP02301 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
H3f3cP02301 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H3f3cP02301 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
H3f3cP02301 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.31■□□□□ 0.2
H3f3cP02301 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H3f3cP02301 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H3f3cP02301 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H3f3cP02301 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
H3f3cP02301 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H3f3cP02301 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H3f3cP02301 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
H3f3cP02301 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
H3f3cP02301 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H3f3cP02301 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.3■□□□□ 0.2
H3f3cP02301 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
H3f3cP02301 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.3■□□□□ 0.2
H3f3cP02301 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
H3f3cP02301 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H3f3cP02301 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H3f3cP02301 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.3■□□□□ 0.2
H3f3cP02301 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H3f3cP02301 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
H3f3cP02301 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
H3f3cP02301 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
H3f3cP02301 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H3f3cP02301 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H3f3cP02301 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H3f3cP02301 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.29■□□□□ 0.2
H3f3cP02301 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
H3f3cP02301 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.29■□□□□ 0.2
H3f3cP02301 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
H3f3cP02301 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
H3f3cP02301 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H3f3cP02301 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.29■□□□□ 0.2
H3f3cP02301 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
H3f3cP02301 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H3f3cP02301 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
H3f3cP02301 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H3f3cP02301 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
H3f3cP02301 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H3f3cP02301 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H3f3cP02301 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms