Protein–RNA interactions for Protein: P01680

Ig kappa chain V-IV region S107B, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01680 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.12■□□□□ 0.33
P01680 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01680 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01680 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P01680 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01680 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
P01680 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01680 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
P01680 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
P01680 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01680 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01680 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.12■□□□□ 0.33
P01680 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01680 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P01680 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01680 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01680 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
P01680 Gm7290-201ENSMUST00000104990 617 ntBASIC17.11■□□□□ 0.33
P01680 Gm12918-201ENSMUST00000120234 636 ntBASIC17.11■□□□□ 0.33
P01680 Gm15710-201ENSMUST00000121821 636 ntBASIC17.11■□□□□ 0.33
P01680 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P01680 Gm5075-201ENSMUST00000196916 622 ntBASIC17.11■□□□□ 0.33
P01680 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01680 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.11■□□□□ 0.33
P01680 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.11■□□□□ 0.33
P01680 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01680 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P01680 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
P01680 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01680 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01680 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
P01680 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01680 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01680 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01680 Gm10602-201ENSMUST00000098239 609 ntBASIC17.1■□□□□ 0.33
P01680 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01680 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01680 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01680 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
P01680 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.1■□□□□ 0.33
P01680 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01680 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01680 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01680 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.1■□□□□ 0.33
P01680 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01680 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01680 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.09■□□□□ 0.33
P01680 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01680 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.09■□□□□ 0.33
P01680 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.09■□□□□ 0.33
P01680 Mir5133-201ENSMUST00000174955 77 ntBASIC17.09■□□□□ 0.33
P01680 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01680 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.09■□□□□ 0.33
P01680 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01680 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01680 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
P01680 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01680 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01680 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
P01680 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P01680 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01680 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
P01680 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01680 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
P01680 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01680 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P01680 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01680 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
P01680 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.08■□□□□ 0.33
P01680 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
P01680 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01680 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01680 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01680 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01680 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.08■□□□□ 0.32
P01680 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P01680 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P01680 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01680 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
P01680 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P01680 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
P01680 Gm13148-201ENSMUST00000118892 745 ntBASIC17.07■□□□□ 0.32
P01680 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
P01680 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01680 Gm6365-201ENSMUST00000054711 744 ntBASIC17.07■□□□□ 0.32
P01680 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P01680 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01680 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.07■□□□□ 0.32
P01680 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
P01680 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01680 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01680 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P01680 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.06■□□□□ 0.32
P01680 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
P01680 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01680 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.06■□□□□ 0.32
P01680 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.06■□□□□ 0.32
P01680 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.06■□□□□ 0.32
P01680 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01680 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms