Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.01■□□□□ 0.31
Hdac3O88895 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.01■□□□□ 0.31
Hdac3O88895 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac3O88895 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac3O88895 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac3O88895 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Hdac3O88895 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac3O88895 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac3O88895 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac3O88895 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac3O88895 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac3O88895 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Hdac3O88895 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hdac3O88895 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hdac3O88895 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Hdac3O88895 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17■□□□□ 0.31
Hdac3O88895 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hdac3O88895 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Hdac3O88895 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17■□□□□ 0.31
Hdac3O88895 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hdac3O88895 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Hdac3O88895 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
Hdac3O88895 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17■□□□□ 0.31
Hdac3O88895 Spcs1-204ENSMUST00000226782 949 ntBASIC17■□□□□ 0.31
Hdac3O88895 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hdac3O88895 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17■□□□□ 0.31
Hdac3O88895 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17■□□□□ 0.31
Hdac3O88895 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Hdac3O88895 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Hdac3O88895 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17■□□□□ 0.31
Hdac3O88895 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Hdac3O88895 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hdac3O88895 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Hdac3O88895 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.99■□□□□ 0.31
Hdac3O88895 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Hdac3O88895 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hdac3O88895 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hdac3O88895 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hdac3O88895 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hdac3O88895 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hdac3O88895 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Hdac3O88895 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hdac3O88895 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Hdac3O88895 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hdac3O88895 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Hdac3O88895 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.99■□□□□ 0.31
Hdac3O88895 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Hdac3O88895 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hdac3O88895 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hdac3O88895 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.99■□□□□ 0.31
Hdac3O88895 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Hdac3O88895 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hdac3O88895 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Hdac3O88895 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Hdac3O88895 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
Hdac3O88895 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hdac3O88895 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.98■□□□□ 0.31
Hdac3O88895 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hdac3O88895 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
Hdac3O88895 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hdac3O88895 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hdac3O88895 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hdac3O88895 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.98■□□□□ 0.31
Hdac3O88895 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hdac3O88895 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hdac3O88895 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hdac3O88895 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Hdac3O88895 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hdac3O88895 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hdac3O88895 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hdac3O88895 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Hdac3O88895 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.97■□□□□ 0.31
Hdac3O88895 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hdac3O88895 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Hdac3O88895 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.97■□□□□ 0.31
Hdac3O88895 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Hdac3O88895 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.96■□□□□ 0.31
Hdac3O88895 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Hdac3O88895 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hdac3O88895 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Hdac3O88895 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Hdac3O88895 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hdac3O88895 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.96■□□□□ 0.31
Hdac3O88895 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.96■□□□□ 0.31
Hdac3O88895 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Hdac3O88895 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hdac3O88895 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hdac3O88895 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hdac3O88895 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Hdac3O88895 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hdac3O88895 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.96■□□□□ 0.3
Hdac3O88895 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Hdac3O88895 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hdac3O88895 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Hdac3O88895 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hdac3O88895 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hdac3O88895 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.95■□□□□ 0.3
Hdac3O88895 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hdac3O88895 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.95■□□□□ 0.3
Hdac3O88895 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms