Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Alx3O70137 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Alx3O70137 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Alx3O70137 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.3■□□□□ 0.36
Alx3O70137 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.3■□□□□ 0.36
Alx3O70137 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Alx3O70137 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Alx3O70137 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Alx3O70137 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Alx3O70137 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Alx3O70137 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Alx3O70137 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Alx3O70137 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Alx3O70137 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.29■□□□□ 0.36
Alx3O70137 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Alx3O70137 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.29■□□□□ 0.36
Alx3O70137 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Alx3O70137 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.29■□□□□ 0.36
Alx3O70137 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.29■□□□□ 0.36
Alx3O70137 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.29■□□□□ 0.36
Alx3O70137 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.29■□□□□ 0.36
Alx3O70137 Gm9847-201ENSMUST00000052528 599 ntBASIC17.29■□□□□ 0.36
Alx3O70137 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Alx3O70137 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Alx3O70137 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Alx3O70137 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Alx3O70137 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Alx3O70137 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Alx3O70137 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Alx3O70137 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Alx3O70137 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Alx3O70137 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.28■□□□□ 0.36
Alx3O70137 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Alx3O70137 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Alx3O70137 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Alx3O70137 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Alx3O70137 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Alx3O70137 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Alx3O70137 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Alx3O70137 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Alx3O70137 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Alx3O70137 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Alx3O70137 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Alx3O70137 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Alx3O70137 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Alx3O70137 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Alx3O70137 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Alx3O70137 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.27■□□□□ 0.36
Alx3O70137 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Alx3O70137 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Alx3O70137 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Alx3O70137 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Alx3O70137 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Alx3O70137 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Alx3O70137 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.26■□□□□ 0.35
Alx3O70137 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Alx3O70137 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Alx3O70137 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Alx3O70137 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Alx3O70137 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.26■□□□□ 0.35
Alx3O70137 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Alx3O70137 Serp2-204ENSMUST00000228055 705 ntBASIC17.26■□□□□ 0.35
Alx3O70137 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.26■□□□□ 0.35
Alx3O70137 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Alx3O70137 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Alx3O70137 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Alx3O70137 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Alx3O70137 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.26■□□□□ 0.35
Alx3O70137 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Alx3O70137 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Alx3O70137 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Alx3O70137 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Alx3O70137 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Alx3O70137 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Alx3O70137 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Alx3O70137 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Alx3O70137 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Alx3O70137 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Alx3O70137 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Alx3O70137 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Alx3O70137 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Alx3O70137 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Alx3O70137 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx3O70137 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx3O70137 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx3O70137 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.24■□□□□ 0.35
Alx3O70137 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Alx3O70137 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.24■□□□□ 0.35
Alx3O70137 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx3O70137 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx3O70137 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx3O70137 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.24■□□□□ 0.35
Alx3O70137 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx3O70137 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Alx3O70137 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx3O70137 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx3O70137 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx3O70137 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx3O70137 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Alx3O70137 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms