Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rdh5O55240 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rdh5O55240 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rdh5O55240 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rdh5O55240 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rdh5O55240 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Rdh5O55240 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rdh5O55240 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Rdh5O55240 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rdh5O55240 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rdh5O55240 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
Rdh5O55240 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rdh5O55240 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rdh5O55240 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rdh5O55240 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rdh5O55240 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.07■□□□□ 0.48
Rdh5O55240 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rdh5O55240 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rdh5O55240 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rdh5O55240 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
Rdh5O55240 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rdh5O55240 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Rdh5O55240 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rdh5O55240 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Rdh5O55240 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rdh5O55240 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rdh5O55240 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Rdh5O55240 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rdh5O55240 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.05■□□□□ 0.48
Rdh5O55240 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rdh5O55240 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rdh5O55240 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rdh5O55240 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.05■□□□□ 0.48
Rdh5O55240 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rdh5O55240 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rdh5O55240 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rdh5O55240 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Rdh5O55240 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rdh5O55240 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.04■□□□□ 0.48
Rdh5O55240 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rdh5O55240 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rdh5O55240 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rdh5O55240 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rdh5O55240 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.04■□□□□ 0.48
Rdh5O55240 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rdh5O55240 Gm27801-201ENSMUST00000184174 223 ntBASIC18.04■□□□□ 0.48
Rdh5O55240 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rdh5O55240 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rdh5O55240 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rdh5O55240 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rdh5O55240 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rdh5O55240 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.04■□□□□ 0.48
Rdh5O55240 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rdh5O55240 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rdh5O55240 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Rdh5O55240 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rdh5O55240 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Rdh5O55240 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.03■□□□□ 0.48
Rdh5O55240 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rdh5O55240 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Rdh5O55240 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rdh5O55240 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rdh5O55240 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rdh5O55240 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rdh5O55240 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rdh5O55240 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rdh5O55240 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rdh5O55240 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rdh5O55240 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rdh5O55240 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rdh5O55240 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rdh5O55240 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Rdh5O55240 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.02■□□□□ 0.48
Rdh5O55240 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rdh5O55240 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rdh5O55240 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rdh5O55240 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rdh5O55240 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rdh5O55240 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Rdh5O55240 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rdh5O55240 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Rdh5O55240 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rdh5O55240 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Rdh5O55240 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rdh5O55240 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rdh5O55240 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rdh5O55240 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rdh5O55240 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Rdh5O55240 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Rdh5O55240 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rdh5O55240 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rdh5O55240 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rdh5O55240 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rdh5O55240 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Rdh5O55240 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rdh5O55240 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18■□□□□ 0.47
Rdh5O55240 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Rdh5O55240 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Rdh5O55240 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rdh5O55240 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms