Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Cntnap1O54991 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Cntnap1O54991 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Cntnap1O54991 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Cntnap1O54991 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Cntnap1O54991 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC25.2■■□□□ 1.63
Cntnap1O54991 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
Cntnap1O54991 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC25.2■■□□□ 1.63
Cntnap1O54991 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Cntnap1O54991 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Cntnap1O54991 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
Cntnap1O54991 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Cntnap1O54991 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Cntnap1O54991 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Cntnap1O54991 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Cntnap1O54991 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Cntnap1O54991 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC25.18■■□□□ 1.62
Cntnap1O54991 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Cntnap1O54991 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cntnap1O54991 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cntnap1O54991 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cntnap1O54991 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cntnap1O54991 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cntnap1O54991 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cntnap1O54991 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC25.18■■□□□ 1.62
Cntnap1O54991 Gm16042-201ENSMUST00000204813 1247 ntBASIC25.18■■□□□ 1.62
Cntnap1O54991 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cntnap1O54991 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
Cntnap1O54991 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
Cntnap1O54991 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Cntnap1O54991 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Cntnap1O54991 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Cntnap1O54991 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Cntnap1O54991 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Cntnap1O54991 Gm10013-201ENSMUST00000106074 672 ntBASIC25.16■■□□□ 1.62
Cntnap1O54991 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Cntnap1O54991 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Cntnap1O54991 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
Cntnap1O54991 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
Cntnap1O54991 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Cntnap1O54991 Gm17971-201ENSMUST00000190239 806 ntBASIC25.15■■□□□ 1.62
Cntnap1O54991 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Cntnap1O54991 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Cntnap1O54991 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Cntnap1O54991 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Cntnap1O54991 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.61
Cntnap1O54991 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
Cntnap1O54991 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Cntnap1O54991 AA414768-201ENSMUST00000121924 1257 ntBASIC25.14■■□□□ 1.61
Cntnap1O54991 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Cntnap1O54991 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Cntnap1O54991 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Cntnap1O54991 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Cntnap1O54991 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC25.13■■□□□ 1.61
Cntnap1O54991 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Cntnap1O54991 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cntnap1O54991 Gm26971-201ENSMUST00000182423 1072 ntBASIC25.12■■□□□ 1.61
Cntnap1O54991 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC25.12■■□□□ 1.61
Cntnap1O54991 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Cntnap1O54991 Gm7461-201ENSMUST00000058918 827 ntBASIC25.12■■□□□ 1.61
Cntnap1O54991 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cntnap1O54991 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cntnap1O54991 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cntnap1O54991 Gm43909-201ENSMUST00000203443 1876 ntBASIC25.11■■□□□ 1.61
Cntnap1O54991 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Cntnap1O54991 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Cntnap1O54991 Gm6802-201ENSMUST00000167843 1983 ntBASIC25.11■■□□□ 1.61
Cntnap1O54991 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Cntnap1O54991 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Cntnap1O54991 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Cntnap1O54991 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Cntnap1O54991 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Cntnap1O54991 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Cntnap1O54991 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
Cntnap1O54991 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
Cntnap1O54991 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Cntnap1O54991 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Cntnap1O54991 AA386476-201ENSMUST00000098781 1665 ntBASIC25.09■■□□□ 1.61
Cntnap1O54991 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Cntnap1O54991 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
Cntnap1O54991 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Cntnap1O54991 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Cntnap1O54991 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Cntnap1O54991 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Cntnap1O54991 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC25.08■■□□□ 1.61
Cntnap1O54991 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
Cntnap1O54991 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Cntnap1O54991 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Cntnap1O54991 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Cntnap1O54991 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Cntnap1O54991 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Cntnap1O54991 Gm43672-201ENSMUST00000199072 1731 ntBASIC25.08■■□□□ 1.61
Cntnap1O54991 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Cntnap1O54991 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
Cntnap1O54991 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Cntnap1O54991 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Cntnap1O54991 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Cntnap1O54991 Odf3b-204ENSMUST00000227834 930 ntBASIC25.06■■□□□ 1.6
Cntnap1O54991 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Cntnap1O54991 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms