Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Gm12922-201ENSMUST00000120626 809 ntBASIC19.44■□□□□ 0.7
Banf1O54962 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Banf1O54962 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Banf1O54962 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Banf1O54962 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Banf1O54962 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Banf1O54962 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Banf1O54962 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Banf1O54962 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Banf1O54962 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Banf1O54962 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Banf1O54962 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Banf1O54962 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Banf1O54962 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Banf1O54962 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
Banf1O54962 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Banf1O54962 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.43■□□□□ 0.7
Banf1O54962 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Banf1O54962 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Banf1O54962 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.42■□□□□ 0.7
Banf1O54962 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Banf1O54962 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Banf1O54962 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Banf1O54962 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Banf1O54962 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Banf1O54962 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Banf1O54962 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Banf1O54962 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Banf1O54962 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Banf1O54962 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Banf1O54962 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Banf1O54962 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Banf1O54962 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Banf1O54962 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Banf1O54962 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Banf1O54962 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Banf1O54962 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.41■□□□□ 0.7
Banf1O54962 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Banf1O54962 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.41■□□□□ 0.7
Banf1O54962 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.41■□□□□ 0.7
Banf1O54962 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Banf1O54962 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Banf1O54962 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.41■□□□□ 0.7
Banf1O54962 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Banf1O54962 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Banf1O54962 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Banf1O54962 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Banf1O54962 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Banf1O54962 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Banf1O54962 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Banf1O54962 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Banf1O54962 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Banf1O54962 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Banf1O54962 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.4■□□□□ 0.7
Banf1O54962 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Banf1O54962 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Banf1O54962 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Banf1O54962 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Banf1O54962 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Banf1O54962 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.4■□□□□ 0.7
Banf1O54962 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Banf1O54962 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Banf1O54962 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Banf1O54962 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Banf1O54962 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Banf1O54962 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Banf1O54962 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Banf1O54962 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Banf1O54962 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Banf1O54962 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Banf1O54962 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Banf1O54962 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Banf1O54962 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Banf1O54962 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Banf1O54962 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Banf1O54962 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
Banf1O54962 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Banf1O54962 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Banf1O54962 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Banf1O54962 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Banf1O54962 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Banf1O54962 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Banf1O54962 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.38■□□□□ 0.69
Banf1O54962 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Banf1O54962 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Banf1O54962 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Banf1O54962 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Banf1O54962 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Banf1O54962 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Banf1O54962 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Banf1O54962 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Banf1O54962 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Banf1O54962 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Banf1O54962 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Banf1O54962 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.37■□□□□ 0.69
Banf1O54962 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Banf1O54962 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.37■□□□□ 0.69
Banf1O54962 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.37■□□□□ 0.69
Banf1O54962 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Banf1O54962 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms