Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Npc1O35604 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Npc1O35604 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Npc1O35604 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.62■□□□□ 0.57
Npc1O35604 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npc1O35604 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.62■□□□□ 0.57
Npc1O35604 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Npc1O35604 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.62■□□□□ 0.57
Npc1O35604 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npc1O35604 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Npc1O35604 Gm9988-201ENSMUST00000069786 435 ntBASIC18.62■□□□□ 0.57
Npc1O35604 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npc1O35604 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npc1O35604 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npc1O35604 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npc1O35604 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npc1O35604 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npc1O35604 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npc1O35604 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Npc1O35604 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Npc1O35604 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Npc1O35604 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.61■□□□□ 0.57
Npc1O35604 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.61■□□□□ 0.57
Npc1O35604 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Npc1O35604 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Npc1O35604 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Npc1O35604 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.61■□□□□ 0.57
Npc1O35604 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Npc1O35604 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Npc1O35604 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Npc1O35604 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npc1O35604 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npc1O35604 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npc1O35604 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.6■□□□□ 0.57
Npc1O35604 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npc1O35604 Gm42569-201ENSMUST00000200539 472 ntBASIC18.6■□□□□ 0.57
Npc1O35604 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.6■□□□□ 0.57
Npc1O35604 Gm10033-202ENSMUST00000211874 928 ntBASIC18.6■□□□□ 0.57
Npc1O35604 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Npc1O35604 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npc1O35604 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npc1O35604 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npc1O35604 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npc1O35604 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npc1O35604 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Npc1O35604 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Npc1O35604 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Npc1O35604 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Npc1O35604 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Npc1O35604 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Npc1O35604 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.59■□□□□ 0.57
Npc1O35604 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Npc1O35604 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Npc1O35604 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Npc1O35604 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Npc1O35604 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Npc1O35604 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Npc1O35604 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Npc1O35604 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Npc1O35604 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Npc1O35604 Gm13234-201ENSMUST00000120010 747 ntBASIC18.58■□□□□ 0.56
Npc1O35604 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.58■□□□□ 0.56
Npc1O35604 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Npc1O35604 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.58■□□□□ 0.56
Npc1O35604 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Npc1O35604 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Npc1O35604 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Npc1O35604 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Npc1O35604 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Npc1O35604 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Npc1O35604 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.57■□□□□ 0.56
Npc1O35604 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Npc1O35604 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Npc1O35604 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Npc1O35604 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Npc1O35604 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Npc1O35604 Gm27405-201ENSMUST00000184201 112 ntBASIC18.57■□□□□ 0.56
Npc1O35604 AV356131-201ENSMUST00000206201 750 ntBASIC18.57■□□□□ 0.56
Npc1O35604 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.57■□□□□ 0.56
Npc1O35604 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.57■□□□□ 0.56
Npc1O35604 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Npc1O35604 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.57■□□□□ 0.56
Npc1O35604 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Npc1O35604 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Npc1O35604 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Npc1O35604 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Npc1O35604 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Npc1O35604 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Npc1O35604 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Npc1O35604 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Npc1O35604 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Npc1O35604 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Npc1O35604 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Npc1O35604 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Npc1O35604 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Npc1O35604 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.56■□□□□ 0.56
Npc1O35604 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Npc1O35604 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Npc1O35604 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Npc1O35604 Gm7291-201ENSMUST00000199147 382 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms