Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf11O35235 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf11O35235 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Tnfsf11O35235 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf11O35235 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf11O35235 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Tnfsf11O35235 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf11O35235 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf11O35235 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf11O35235 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf11O35235 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf11O35235 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Tnfsf11O35235 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf11O35235 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Tnfsf11O35235 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfsf11O35235 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Tnfsf11O35235 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfsf11O35235 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfsf11O35235 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Tnfsf11O35235 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC14.91□□□□□ -0.02
Tnfsf11O35235 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.91□□□□□ -0.02
Tnfsf11O35235 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfsf11O35235 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfsf11O35235 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.91□□□□□ -0.02
Tnfsf11O35235 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Tnfsf11O35235 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.9□□□□□ -0.02
Tnfsf11O35235 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
Tnfsf11O35235 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Tnfsf11O35235 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Tnfsf11O35235 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfsf11O35235 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfsf11O35235 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfsf11O35235 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Tnfsf11O35235 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfsf11O35235 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfsf11O35235 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfsf11O35235 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfsf11O35235 Gm43566-201ENSMUST00000196851 808 ntBASIC14.9□□□□□ -0.02
Tnfsf11O35235 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC14.9□□□□□ -0.02
Tnfsf11O35235 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Tnfsf11O35235 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfsf11O35235 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfsf11O35235 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfsf11O35235 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.9□□□□□ -0.02
Tnfsf11O35235 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfsf11O35235 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.9□□□□□ -0.02
Tnfsf11O35235 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfsf11O35235 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfsf11O35235 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfsf11O35235 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfsf11O35235 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfsf11O35235 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.89□□□□□ -0.03
Tnfsf11O35235 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfsf11O35235 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfsf11O35235 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfsf11O35235 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfsf11O35235 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfsf11O35235 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC14.89□□□□□ -0.03
Tnfsf11O35235 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Tnfsf11O35235 Gm5921-201ENSMUST00000075898 882 ntBASIC14.89□□□□□ -0.03
Tnfsf11O35235 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfsf11O35235 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfsf11O35235 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfsf11O35235 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfsf11O35235 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.89□□□□□ -0.03
Tnfsf11O35235 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Tnfsf11O35235 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfsf11O35235 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfsf11O35235 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfsf11O35235 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfsf11O35235 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Tnfsf11O35235 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfsf11O35235 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Tnfsf11O35235 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfsf11O35235 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Tnfsf11O35235 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC14.88□□□□□ -0.03
Tnfsf11O35235 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14.88□□□□□ -0.03
Tnfsf11O35235 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfsf11O35235 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.88□□□□□ -0.03
Tnfsf11O35235 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfsf11O35235 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Tnfsf11O35235 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfsf11O35235 Gm45640-201ENSMUST00000210665 1896 ntBASIC14.88□□□□□ -0.03
Tnfsf11O35235 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfsf11O35235 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfsf11O35235 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfsf11O35235 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Tnfsf11O35235 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfsf11O35235 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsf11O35235 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsf11O35235 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsf11O35235 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.87□□□□□ -0.03
Tnfsf11O35235 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsf11O35235 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsf11O35235 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsf11O35235 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsf11O35235 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsf11O35235 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsf11O35235 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfsf11O35235 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms