Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dchs1E9PVD3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dchs1E9PVD3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.12■□□□□ 0.33
Dchs1E9PVD3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dchs1E9PVD3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Dchs1E9PVD3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dchs1E9PVD3 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dchs1E9PVD3 Mir6236-201ENSMUST00000184437 123 ntBASIC17.11■□□□□ 0.33
Dchs1E9PVD3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dchs1E9PVD3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dchs1E9PVD3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dchs1E9PVD3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dchs1E9PVD3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dchs1E9PVD3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Dchs1E9PVD3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.11■□□□□ 0.33
Dchs1E9PVD3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Dchs1E9PVD3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dchs1E9PVD3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Dchs1E9PVD3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Dchs1E9PVD3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dchs1E9PVD3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dchs1E9PVD3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Dchs1E9PVD3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dchs1E9PVD3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dchs1E9PVD3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Dchs1E9PVD3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dchs1E9PVD3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dchs1E9PVD3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Dchs1E9PVD3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.1■□□□□ 0.33
Dchs1E9PVD3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dchs1E9PVD3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.1■□□□□ 0.33
Dchs1E9PVD3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.1■□□□□ 0.33
Dchs1E9PVD3 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dchs1E9PVD3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Dchs1E9PVD3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dchs1E9PVD3 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Dchs1E9PVD3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dchs1E9PVD3 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dchs1E9PVD3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dchs1E9PVD3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Dchs1E9PVD3 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.1■□□□□ 0.33
Dchs1E9PVD3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Dchs1E9PVD3 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.1■□□□□ 0.33
Dchs1E9PVD3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dchs1E9PVD3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Dchs1E9PVD3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Dchs1E9PVD3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.1■□□□□ 0.33
Dchs1E9PVD3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Dchs1E9PVD3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dchs1E9PVD3 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.09■□□□□ 0.33
Dchs1E9PVD3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Dchs1E9PVD3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dchs1E9PVD3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dchs1E9PVD3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dchs1E9PVD3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dchs1E9PVD3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dchs1E9PVD3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Dchs1E9PVD3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.09■□□□□ 0.33
Dchs1E9PVD3 Gm38205-201ENSMUST00000192243 258 ntBASIC17.09■□□□□ 0.33
Dchs1E9PVD3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dchs1E9PVD3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dchs1E9PVD3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dchs1E9PVD3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dchs1E9PVD3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dchs1E9PVD3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Dchs1E9PVD3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.08■□□□□ 0.33
Dchs1E9PVD3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Dchs1E9PVD3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Dchs1E9PVD3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dchs1E9PVD3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Dchs1E9PVD3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dchs1E9PVD3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Dchs1E9PVD3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dchs1E9PVD3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dchs1E9PVD3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Dchs1E9PVD3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dchs1E9PVD3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Dchs1E9PVD3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.08■□□□□ 0.32
Dchs1E9PVD3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dchs1E9PVD3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dchs1E9PVD3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dchs1E9PVD3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dchs1E9PVD3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Dchs1E9PVD3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Dchs1E9PVD3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dchs1E9PVD3 Gm11249-201ENSMUST00000117071 859 ntBASIC17.07■□□□□ 0.32
Dchs1E9PVD3 Gm6433-201ENSMUST00000118634 875 ntBASIC17.07■□□□□ 0.32
Dchs1E9PVD3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.07■□□□□ 0.32
Dchs1E9PVD3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dchs1E9PVD3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Dchs1E9PVD3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dchs1E9PVD3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dchs1E9PVD3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dchs1E9PVD3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.07■□□□□ 0.32
Dchs1E9PVD3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Dchs1E9PVD3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Dchs1E9PVD3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Dchs1E9PVD3 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.06■□□□□ 0.32
Dchs1E9PVD3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Dchs1E9PVD3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms