Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 Gm7514-201ENSMUST00000209475 934 ntBASIC20.68■□□□□ 0.9
Clca3bE9PUL3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Clca3bE9PUL3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clca3bE9PUL3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Clca3bE9PUL3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clca3bE9PUL3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clca3bE9PUL3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Clca3bE9PUL3 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.67■□□□□ 0.9
Clca3bE9PUL3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.67■□□□□ 0.9
Clca3bE9PUL3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clca3bE9PUL3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Clca3bE9PUL3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clca3bE9PUL3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clca3bE9PUL3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clca3bE9PUL3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clca3bE9PUL3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Clca3bE9PUL3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clca3bE9PUL3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clca3bE9PUL3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clca3bE9PUL3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clca3bE9PUL3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clca3bE9PUL3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.66■□□□□ 0.9
Clca3bE9PUL3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Clca3bE9PUL3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Clca3bE9PUL3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clca3bE9PUL3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.66■□□□□ 0.9
Clca3bE9PUL3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Clca3bE9PUL3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clca3bE9PUL3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clca3bE9PUL3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Clca3bE9PUL3 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.66■□□□□ 0.9
Clca3bE9PUL3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Clca3bE9PUL3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clca3bE9PUL3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clca3bE9PUL3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clca3bE9PUL3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Clca3bE9PUL3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.65■□□□□ 0.9
Clca3bE9PUL3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Clca3bE9PUL3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Clca3bE9PUL3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Clca3bE9PUL3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Clca3bE9PUL3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Clca3bE9PUL3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Clca3bE9PUL3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Clca3bE9PUL3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clca3bE9PUL3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.64■□□□□ 0.89
Clca3bE9PUL3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.64■□□□□ 0.89
Clca3bE9PUL3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Clca3bE9PUL3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clca3bE9PUL3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.63■□□□□ 0.89
Clca3bE9PUL3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Clca3bE9PUL3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Clca3bE9PUL3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clca3bE9PUL3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clca3bE9PUL3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Clca3bE9PUL3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.63■□□□□ 0.89
Clca3bE9PUL3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Clca3bE9PUL3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clca3bE9PUL3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Clca3bE9PUL3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Clca3bE9PUL3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clca3bE9PUL3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Clca3bE9PUL3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Clca3bE9PUL3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Clca3bE9PUL3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Clca3bE9PUL3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Clca3bE9PUL3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Clca3bE9PUL3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Clca3bE9PUL3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Clca3bE9PUL3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Clca3bE9PUL3 Golph3-202ENSMUST00000226517 2359 ntBASIC20.61■□□□□ 0.89
Clca3bE9PUL3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clca3bE9PUL3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clca3bE9PUL3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clca3bE9PUL3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Clca3bE9PUL3 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.6■□□□□ 0.89
Clca3bE9PUL3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Clca3bE9PUL3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clca3bE9PUL3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.6■□□□□ 0.89
Clca3bE9PUL3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clca3bE9PUL3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Clca3bE9PUL3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clca3bE9PUL3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clca3bE9PUL3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clca3bE9PUL3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Clca3bE9PUL3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Clca3bE9PUL3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clca3bE9PUL3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.59■□□□□ 0.89
Clca3bE9PUL3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clca3bE9PUL3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.59■□□□□ 0.89
Clca3bE9PUL3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.59■□□□□ 0.89
Clca3bE9PUL3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clca3bE9PUL3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clca3bE9PUL3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Clca3bE9PUL3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clca3bE9PUL3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clca3bE9PUL3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Clca3bE9PUL3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clca3bE9PUL3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Clca3bE9PUL3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms