Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Hfm1D3Z4R1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Hfm1D3Z4R1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
Hfm1D3Z4R1 Gm2399-201ENSMUST00000104944 225 ntBASIC27.25■■□□□ 1.95
Hfm1D3Z4R1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC27.25■■□□□ 1.95
Hfm1D3Z4R1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Hfm1D3Z4R1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
Hfm1D3Z4R1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
Hfm1D3Z4R1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
Hfm1D3Z4R1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Hfm1D3Z4R1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Hfm1D3Z4R1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Hfm1D3Z4R1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Hfm1D3Z4R1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Hfm1D3Z4R1 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC27.24■■□□□ 1.95
Hfm1D3Z4R1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Hfm1D3Z4R1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
Hfm1D3Z4R1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC27.23■■□□□ 1.95
Hfm1D3Z4R1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC27.23■■□□□ 1.95
Hfm1D3Z4R1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC27.23■■□□□ 1.95
Hfm1D3Z4R1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Hfm1D3Z4R1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Hfm1D3Z4R1 Gm13042-201ENSMUST00000119244 1955 ntBASIC27.22■■□□□ 1.95
Hfm1D3Z4R1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Hfm1D3Z4R1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Hfm1D3Z4R1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC27.22■■□□□ 1.95
Hfm1D3Z4R1 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Hfm1D3Z4R1 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC27.22■■□□□ 1.95
Hfm1D3Z4R1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Hfm1D3Z4R1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Hfm1D3Z4R1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Hfm1D3Z4R1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC27.21■■□□□ 1.95
Hfm1D3Z4R1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Hfm1D3Z4R1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
Hfm1D3Z4R1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
Hfm1D3Z4R1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC27.2■■□□□ 1.94
Hfm1D3Z4R1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Hfm1D3Z4R1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Hfm1D3Z4R1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Hfm1D3Z4R1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Hfm1D3Z4R1 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Hfm1D3Z4R1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Hfm1D3Z4R1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC27.2■■□□□ 1.94
Hfm1D3Z4R1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC27.19■■□□□ 1.94
Hfm1D3Z4R1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Hfm1D3Z4R1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Hfm1D3Z4R1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Hfm1D3Z4R1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
Hfm1D3Z4R1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC27.19■■□□□ 1.94
Hfm1D3Z4R1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Hfm1D3Z4R1 Gm15378-201ENSMUST00000121894 207 ntBASIC27.18■■□□□ 1.94
Hfm1D3Z4R1 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Hfm1D3Z4R1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC27.18■■□□□ 1.94
Hfm1D3Z4R1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Hfm1D3Z4R1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Hfm1D3Z4R1 Gm43672-201ENSMUST00000199072 1731 ntBASIC27.17■■□□□ 1.94
Hfm1D3Z4R1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Hfm1D3Z4R1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Hfm1D3Z4R1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC27.17■■□□□ 1.94
Hfm1D3Z4R1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Hfm1D3Z4R1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Hfm1D3Z4R1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Hfm1D3Z4R1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Hfm1D3Z4R1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Hfm1D3Z4R1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Hfm1D3Z4R1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC27.16■■□□□ 1.94
Hfm1D3Z4R1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC27.16■■□□□ 1.94
Hfm1D3Z4R1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC27.16■■□□□ 1.94
Hfm1D3Z4R1 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC27.16■■□□□ 1.94
Hfm1D3Z4R1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC27.16■■□□□ 1.94
Hfm1D3Z4R1 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
Hfm1D3Z4R1 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Hfm1D3Z4R1 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Hfm1D3Z4R1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC27.16■■□□□ 1.94
Hfm1D3Z4R1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
Hfm1D3Z4R1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Hfm1D3Z4R1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Hfm1D3Z4R1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Hfm1D3Z4R1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
Hfm1D3Z4R1 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Hfm1D3Z4R1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Hfm1D3Z4R1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC27.15■■□□□ 1.94
Hfm1D3Z4R1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Hfm1D3Z4R1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
Hfm1D3Z4R1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Hfm1D3Z4R1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC27.15■■□□□ 1.94
Hfm1D3Z4R1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Hfm1D3Z4R1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC27.14■■□□□ 1.94
Hfm1D3Z4R1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Hfm1D3Z4R1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC27.14■■□□□ 1.94
Hfm1D3Z4R1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Hfm1D3Z4R1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.93
Hfm1D3Z4R1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.93
Hfm1D3Z4R1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Hfm1D3Z4R1 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC27.14■■□□□ 1.93
Hfm1D3Z4R1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC27.14■■□□□ 1.93
Hfm1D3Z4R1 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
Hfm1D3Z4R1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Hfm1D3Z4R1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
Hfm1D3Z4R1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms