Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ptchd4B9EKX1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ptchd4B9EKX1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ptchd4B9EKX1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ptchd4B9EKX1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ptchd4B9EKX1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ptchd4B9EKX1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ptchd4B9EKX1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Ptchd4B9EKX1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ptchd4B9EKX1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ptchd4B9EKX1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptchd4B9EKX1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ptchd4B9EKX1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Ptchd4B9EKX1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.64■□□□□ 0.89
Ptchd4B9EKX1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ptchd4B9EKX1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptchd4B9EKX1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptchd4B9EKX1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptchd4B9EKX1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptchd4B9EKX1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ptchd4B9EKX1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.64■□□□□ 0.89
Ptchd4B9EKX1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptchd4B9EKX1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptchd4B9EKX1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptchd4B9EKX1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Ptchd4B9EKX1 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.63■□□□□ 0.89
Ptchd4B9EKX1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Ptchd4B9EKX1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptchd4B9EKX1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptchd4B9EKX1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptchd4B9EKX1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptchd4B9EKX1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptchd4B9EKX1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Ptchd4B9EKX1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Ptchd4B9EKX1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ptchd4B9EKX1 Gm20760-201ENSMUST00000179197 648 ntBASIC20.62■□□□□ 0.89
Ptchd4B9EKX1 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.62■□□□□ 0.89
Ptchd4B9EKX1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptchd4B9EKX1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptchd4B9EKX1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ptchd4B9EKX1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptchd4B9EKX1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptchd4B9EKX1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptchd4B9EKX1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptchd4B9EKX1 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ptchd4B9EKX1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptchd4B9EKX1 Gm26524-201ENSMUST00000192339 390 ntBASIC20.61■□□□□ 0.89
Ptchd4B9EKX1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.61■□□□□ 0.89
Ptchd4B9EKX1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ptchd4B9EKX1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptchd4B9EKX1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptchd4B9EKX1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptchd4B9EKX1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptchd4B9EKX1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptchd4B9EKX1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ptchd4B9EKX1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptchd4B9EKX1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptchd4B9EKX1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptchd4B9EKX1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptchd4B9EKX1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptchd4B9EKX1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Ptchd4B9EKX1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptchd4B9EKX1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.6■□□□□ 0.89
Ptchd4B9EKX1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
Ptchd4B9EKX1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ptchd4B9EKX1 Gm20049-201ENSMUST00000219950 730 ntBASIC20.6■□□□□ 0.89
Ptchd4B9EKX1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.6■□□□□ 0.89
Ptchd4B9EKX1 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ptchd4B9EKX1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptchd4B9EKX1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptchd4B9EKX1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ptchd4B9EKX1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Ptchd4B9EKX1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ptchd4B9EKX1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ptchd4B9EKX1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ptchd4B9EKX1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ptchd4B9EKX1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ptchd4B9EKX1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ptchd4B9EKX1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ptchd4B9EKX1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Ptchd4B9EKX1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ptchd4B9EKX1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.59■□□□□ 0.89
Ptchd4B9EKX1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ptchd4B9EKX1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ptchd4B9EKX1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ptchd4B9EKX1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ptchd4B9EKX1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ptchd4B9EKX1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ptchd4B9EKX1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ptchd4B9EKX1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ptchd4B9EKX1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ptchd4B9EKX1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ptchd4B9EKX1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ptchd4B9EKX1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ptchd4B9EKX1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ptchd4B9EKX1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Ptchd4B9EKX1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ptchd4B9EKX1 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ptchd4B9EKX1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ptchd4B9EKX1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms