Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Lnp1A0A1B0GSK3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lnp1A0A1B0GSK3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Lnp1A0A1B0GSK3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lnp1A0A1B0GSK3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lnp1A0A1B0GSK3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Lnp1A0A1B0GSK3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
Lnp1A0A1B0GSK3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lnp1A0A1B0GSK3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Lnp1A0A1B0GSK3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.89■□□□□ 0.13
Lnp1A0A1B0GSK3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lnp1A0A1B0GSK3 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.89■□□□□ 0.13
Lnp1A0A1B0GSK3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lnp1A0A1B0GSK3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Lnp1A0A1B0GSK3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lnp1A0A1B0GSK3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Lnp1A0A1B0GSK3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Lnp1A0A1B0GSK3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lnp1A0A1B0GSK3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lnp1A0A1B0GSK3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Lnp1A0A1B0GSK3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lnp1A0A1B0GSK3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Lnp1A0A1B0GSK3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lnp1A0A1B0GSK3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lnp1A0A1B0GSK3 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lnp1A0A1B0GSK3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Lnp1A0A1B0GSK3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lnp1A0A1B0GSK3 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Lnp1A0A1B0GSK3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC15.88■□□□□ 0.13
Lnp1A0A1B0GSK3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lnp1A0A1B0GSK3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lnp1A0A1B0GSK3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Lnp1A0A1B0GSK3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Lnp1A0A1B0GSK3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.88■□□□□ 0.13
Lnp1A0A1B0GSK3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lnp1A0A1B0GSK3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Lnp1A0A1B0GSK3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Lnp1A0A1B0GSK3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lnp1A0A1B0GSK3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lnp1A0A1B0GSK3 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC15.87■□□□□ 0.13
Lnp1A0A1B0GSK3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.87■□□□□ 0.13
Lnp1A0A1B0GSK3 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Lnp1A0A1B0GSK3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lnp1A0A1B0GSK3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lnp1A0A1B0GSK3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lnp1A0A1B0GSK3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lnp1A0A1B0GSK3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lnp1A0A1B0GSK3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Lnp1A0A1B0GSK3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lnp1A0A1B0GSK3 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lnp1A0A1B0GSK3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
Lnp1A0A1B0GSK3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Lnp1A0A1B0GSK3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lnp1A0A1B0GSK3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Lnp1A0A1B0GSK3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lnp1A0A1B0GSK3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lnp1A0A1B0GSK3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lnp1A0A1B0GSK3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lnp1A0A1B0GSK3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Lnp1A0A1B0GSK3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lnp1A0A1B0GSK3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Lnp1A0A1B0GSK3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC15.86■□□□□ 0.13
Lnp1A0A1B0GSK3 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lnp1A0A1B0GSK3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lnp1A0A1B0GSK3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lnp1A0A1B0GSK3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lnp1A0A1B0GSK3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lnp1A0A1B0GSK3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lnp1A0A1B0GSK3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lnp1A0A1B0GSK3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Lnp1A0A1B0GSK3 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC15.85■□□□□ 0.13
Lnp1A0A1B0GSK3 Gm26833-201ENSMUST00000180899 440 ntBASIC15.85■□□□□ 0.13
Lnp1A0A1B0GSK3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Lnp1A0A1B0GSK3 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Lnp1A0A1B0GSK3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lnp1A0A1B0GSK3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lnp1A0A1B0GSK3 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lnp1A0A1B0GSK3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Lnp1A0A1B0GSK3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
Lnp1A0A1B0GSK3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lnp1A0A1B0GSK3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lnp1A0A1B0GSK3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lnp1A0A1B0GSK3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.84■□□□□ 0.13
Lnp1A0A1B0GSK3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.84■□□□□ 0.13
Lnp1A0A1B0GSK3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.84■□□□□ 0.13
Lnp1A0A1B0GSK3 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC15.84■□□□□ 0.13
Lnp1A0A1B0GSK3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Lnp1A0A1B0GSK3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Lnp1A0A1B0GSK3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.84■□□□□ 0.13
Lnp1A0A1B0GSK3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Lnp1A0A1B0GSK3 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC15.84■□□□□ 0.13
Lnp1A0A1B0GSK3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lnp1A0A1B0GSK3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Lnp1A0A1B0GSK3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lnp1A0A1B0GSK3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lnp1A0A1B0GSK3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Lnp1A0A1B0GSK3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Lnp1A0A1B0GSK3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.83■□□□□ 0.13
Lnp1A0A1B0GSK3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Lnp1A0A1B0GSK3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms