Protein–RNA interactions for Protein: A0A0R3P9D1

Gm42688, Predicted gene 42688, mousemouse

Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm42688A0A0R3P9D1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm42688A0A0R3P9D1 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.71■■□□□ 1.07
Gm42688A0A0R3P9D1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Gm42688A0A0R3P9D1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm42688A0A0R3P9D1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Gm42688A0A0R3P9D1 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC21.7■■□□□ 1.06
Gm42688A0A0R3P9D1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC21.7■■□□□ 1.06
Gm42688A0A0R3P9D1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm42688A0A0R3P9D1 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Gm42688A0A0R3P9D1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Gm42688A0A0R3P9D1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm42688A0A0R3P9D1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm42688A0A0R3P9D1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm42688A0A0R3P9D1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm42688A0A0R3P9D1 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Gm42688A0A0R3P9D1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
Gm42688A0A0R3P9D1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm42688A0A0R3P9D1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm42688A0A0R3P9D1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm42688A0A0R3P9D1 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm42688A0A0R3P9D1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm42688A0A0R3P9D1 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Gm42688A0A0R3P9D1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Gm42688A0A0R3P9D1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gm42688A0A0R3P9D1 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Gm42688A0A0R3P9D1 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.68■■□□□ 1.06
Gm42688A0A0R3P9D1 Gm30025-201ENSMUST00000218555 728 ntBASIC21.68■■□□□ 1.06
Gm42688A0A0R3P9D1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gm42688A0A0R3P9D1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Gm42688A0A0R3P9D1 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm42688A0A0R3P9D1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Gm42688A0A0R3P9D1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.67■■□□□ 1.06
Gm42688A0A0R3P9D1 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm42688A0A0R3P9D1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm42688A0A0R3P9D1 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm42688A0A0R3P9D1 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm42688A0A0R3P9D1 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm42688A0A0R3P9D1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm42688A0A0R3P9D1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm42688A0A0R3P9D1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.67■■□□□ 1.06
Gm42688A0A0R3P9D1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Gm42688A0A0R3P9D1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm42688A0A0R3P9D1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Gm42688A0A0R3P9D1 Gm21814-202ENSMUST00000203277 873 ntBASIC21.66■■□□□ 1.06
Gm42688A0A0R3P9D1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC21.66■■□□□ 1.06
Gm42688A0A0R3P9D1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Gm42688A0A0R3P9D1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm42688A0A0R3P9D1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm42688A0A0R3P9D1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Gm42688A0A0R3P9D1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm42688A0A0R3P9D1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm42688A0A0R3P9D1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm42688A0A0R3P9D1 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm42688A0A0R3P9D1 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.65■■□□□ 1.06
Gm42688A0A0R3P9D1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Gm42688A0A0R3P9D1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Gm42688A0A0R3P9D1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm42688A0A0R3P9D1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm42688A0A0R3P9D1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm42688A0A0R3P9D1 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC21.65■■□□□ 1.06
Gm42688A0A0R3P9D1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm42688A0A0R3P9D1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Gm42688A0A0R3P9D1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Gm42688A0A0R3P9D1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Gm42688A0A0R3P9D1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Gm42688A0A0R3P9D1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC21.64■■□□□ 1.05
Gm42688A0A0R3P9D1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Gm42688A0A0R3P9D1 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Gm42688A0A0R3P9D1 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Gm42688A0A0R3P9D1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Gm42688A0A0R3P9D1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Gm42688A0A0R3P9D1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Gm42688A0A0R3P9D1 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC21.63■■□□□ 1.05
Gm42688A0A0R3P9D1 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.63■■□□□ 1.05
Gm42688A0A0R3P9D1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Gm42688A0A0R3P9D1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gm42688A0A0R3P9D1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Gm42688A0A0R3P9D1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gm42688A0A0R3P9D1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC21.63■■□□□ 1.05
Gm42688A0A0R3P9D1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Gm42688A0A0R3P9D1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gm42688A0A0R3P9D1 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Gm42688A0A0R3P9D1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.63■■□□□ 1.05
Gm42688A0A0R3P9D1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Gm42688A0A0R3P9D1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm42688A0A0R3P9D1 Gm13559-201ENSMUST00000120476 863 ntBASIC21.62■■□□□ 1.05
Gm42688A0A0R3P9D1 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Gm42688A0A0R3P9D1 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm42688A0A0R3P9D1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Gm42688A0A0R3P9D1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Gm42688A0A0R3P9D1 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.61■■□□□ 1.05
Gm42688A0A0R3P9D1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Gm42688A0A0R3P9D1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm42688A0A0R3P9D1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm42688A0A0R3P9D1 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm42688A0A0R3P9D1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Gm42688A0A0R3P9D1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Gm42688A0A0R3P9D1 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Gm42688A0A0R3P9D1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Gm42688A0A0R3P9D1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms