Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9d-4A0A0G2JG37 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9d-4A0A0G2JG37 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9d-4A0A0G2JG37 Gm38342-201ENSMUST00000195710 2980 ntBASIC13.1□□□□□ -0.31
Trav9d-4A0A0G2JG37 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9d-4A0A0G2JG37 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav9d-4A0A0G2JG37 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9d-4A0A0G2JG37 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9d-4A0A0G2JG37 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9d-4A0A0G2JG37 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9d-4A0A0G2JG37 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav9d-4A0A0G2JG37 AC126028.2-201ENSMUST00000228100 1833 ntBASIC13.1□□□□□ -0.31
Trav9d-4A0A0G2JG37 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9d-4A0A0G2JG37 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav9d-4A0A0G2JG37 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9d-4A0A0G2JG37 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav9d-4A0A0G2JG37 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9d-4A0A0G2JG37 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9d-4A0A0G2JG37 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9d-4A0A0G2JG37 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9d-4A0A0G2JG37 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav9d-4A0A0G2JG37 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav9d-4A0A0G2JG37 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9d-4A0A0G2JG37 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9d-4A0A0G2JG37 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9d-4A0A0G2JG37 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9d-4A0A0G2JG37 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9d-4A0A0G2JG37 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9d-4A0A0G2JG37 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Trav9d-4A0A0G2JG37 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Trav9d-4A0A0G2JG37 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav9d-4A0A0G2JG37 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9d-4A0A0G2JG37 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Trav9d-4A0A0G2JG37 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9d-4A0A0G2JG37 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9d-4A0A0G2JG37 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trav9d-4A0A0G2JG37 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9d-4A0A0G2JG37 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9d-4A0A0G2JG37 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9d-4A0A0G2JG37 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav9d-4A0A0G2JG37 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9d-4A0A0G2JG37 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9d-4A0A0G2JG37 Cap2-205ENSMUST00000225824 1634 ntBASIC13.08□□□□□ -0.32
Trav9d-4A0A0G2JG37 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9d-4A0A0G2JG37 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9d-4A0A0G2JG37 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9d-4A0A0G2JG37 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav9d-4A0A0G2JG37 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav9d-4A0A0G2JG37 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9d-4A0A0G2JG37 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav9d-4A0A0G2JG37 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Trav9d-4A0A0G2JG37 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9d-4A0A0G2JG37 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9d-4A0A0G2JG37 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9d-4A0A0G2JG37 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9d-4A0A0G2JG37 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9d-4A0A0G2JG37 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9d-4A0A0G2JG37 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9d-4A0A0G2JG37 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9d-4A0A0G2JG37 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav9d-4A0A0G2JG37 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9d-4A0A0G2JG37 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9d-4A0A0G2JG37 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav9d-4A0A0G2JG37 Gm16464-201ENSMUST00000117815 1095 ntBASIC13.06□□□□□ -0.32
Trav9d-4A0A0G2JG37 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9d-4A0A0G2JG37 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trav9d-4A0A0G2JG37 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9d-4A0A0G2JG37 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9d-4A0A0G2JG37 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9d-4A0A0G2JG37 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9d-4A0A0G2JG37 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav9d-4A0A0G2JG37 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9d-4A0A0G2JG37 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9d-4A0A0G2JG37 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9d-4A0A0G2JG37 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9d-4A0A0G2JG37 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9d-4A0A0G2JG37 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9d-4A0A0G2JG37 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Trav9d-4A0A0G2JG37 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-4A0A0G2JG37 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-4A0A0G2JG37 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-4A0A0G2JG37 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-4A0A0G2JG37 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-4A0A0G2JG37 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav9d-4A0A0G2JG37 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC13.05□□□□□ -0.32
Trav9d-4A0A0G2JG37 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav9d-4A0A0G2JG37 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-4A0A0G2JG37 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-4A0A0G2JG37 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-4A0A0G2JG37 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-4A0A0G2JG37 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-4A0A0G2JG37 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-4A0A0G2JG37 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-4A0A0G2JG37 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-4A0A0G2JG37 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-4A0A0G2JG37 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-4A0A0G2JG37 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-4A0A0G2JG37 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav9d-4A0A0G2JG37 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-4A0A0G2JG37 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms