Protein–RNA interactions for Protein: A0A0B4J1P5

Trbv26, T cell receptor beta, variable 26 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv26A0A0B4J1P5 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv26A0A0B4J1P5 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv26A0A0B4J1P5 Iqck-206ENSMUST00000208658 2891 ntBASIC15.93■□□□□ 0.14
Trbv26A0A0B4J1P5 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Trbv26A0A0B4J1P5 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv26A0A0B4J1P5 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv26A0A0B4J1P5 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv26A0A0B4J1P5 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv26A0A0B4J1P5 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv26A0A0B4J1P5 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trbv26A0A0B4J1P5 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv26A0A0B4J1P5 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv26A0A0B4J1P5 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
Trbv26A0A0B4J1P5 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv26A0A0B4J1P5 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Trbv26A0A0B4J1P5 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trbv26A0A0B4J1P5 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv26A0A0B4J1P5 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.92■□□□□ 0.14
Trbv26A0A0B4J1P5 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv26A0A0B4J1P5 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv26A0A0B4J1P5 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trbv26A0A0B4J1P5 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trbv26A0A0B4J1P5 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv26A0A0B4J1P5 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv26A0A0B4J1P5 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv26A0A0B4J1P5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv26A0A0B4J1P5 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv26A0A0B4J1P5 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv26A0A0B4J1P5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv26A0A0B4J1P5 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv26A0A0B4J1P5 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv26A0A0B4J1P5 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv26A0A0B4J1P5 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.91■□□□□ 0.14
Trbv26A0A0B4J1P5 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.91■□□□□ 0.14
Trbv26A0A0B4J1P5 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv26A0A0B4J1P5 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.91■□□□□ 0.14
Trbv26A0A0B4J1P5 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv26A0A0B4J1P5 Gm34220-201ENSMUST00000223001 2709 ntBASIC15.91■□□□□ 0.14
Trbv26A0A0B4J1P5 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv26A0A0B4J1P5 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv26A0A0B4J1P5 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv26A0A0B4J1P5 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.91■□□□□ 0.14
Trbv26A0A0B4J1P5 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv26A0A0B4J1P5 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv26A0A0B4J1P5 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv26A0A0B4J1P5 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.91■□□□□ 0.14
Trbv26A0A0B4J1P5 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv26A0A0B4J1P5 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trbv26A0A0B4J1P5 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv26A0A0B4J1P5 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.9■□□□□ 0.14
Trbv26A0A0B4J1P5 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv26A0A0B4J1P5 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv26A0A0B4J1P5 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Trbv26A0A0B4J1P5 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Trbv26A0A0B4J1P5 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv26A0A0B4J1P5 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv26A0A0B4J1P5 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
Trbv26A0A0B4J1P5 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.89■□□□□ 0.13
Trbv26A0A0B4J1P5 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.89■□□□□ 0.13
Trbv26A0A0B4J1P5 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
Trbv26A0A0B4J1P5 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv26A0A0B4J1P5 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv26A0A0B4J1P5 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trbv26A0A0B4J1P5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trbv26A0A0B4J1P5 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv26A0A0B4J1P5 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.89■□□□□ 0.13
Trbv26A0A0B4J1P5 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv26A0A0B4J1P5 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv26A0A0B4J1P5 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trbv26A0A0B4J1P5 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv26A0A0B4J1P5 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv26A0A0B4J1P5 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trbv26A0A0B4J1P5 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.88■□□□□ 0.13
Trbv26A0A0B4J1P5 Gm9988-201ENSMUST00000069786 435 ntBASIC15.88■□□□□ 0.13
Trbv26A0A0B4J1P5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trbv26A0A0B4J1P5 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv26A0A0B4J1P5 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv26A0A0B4J1P5 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv26A0A0B4J1P5 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv26A0A0B4J1P5 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trbv26A0A0B4J1P5 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Trbv26A0A0B4J1P5 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv26A0A0B4J1P5 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv26A0A0B4J1P5 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv26A0A0B4J1P5 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv26A0A0B4J1P5 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv26A0A0B4J1P5 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv26A0A0B4J1P5 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv26A0A0B4J1P5 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv26A0A0B4J1P5 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.87■□□□□ 0.13
Trbv26A0A0B4J1P5 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.87■□□□□ 0.13
Trbv26A0A0B4J1P5 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
Trbv26A0A0B4J1P5 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv26A0A0B4J1P5 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trbv26A0A0B4J1P5 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Trbv26A0A0B4J1P5 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv26A0A0B4J1P5 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv26A0A0B4J1P5 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv26A0A0B4J1P5 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv26A0A0B4J1P5 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms