Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv12-1A0A0B4J1H0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.95■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.95■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Gm9988-201ENSMUST00000069786 435 ntBASIC16.95■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trbv12-1A0A0B4J1H0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trbv12-1A0A0B4J1H0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
Trbv12-1A0A0B4J1H0 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.94■□□□□ 0.3
Trbv12-1A0A0B4J1H0 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.94■□□□□ 0.3
Trbv12-1A0A0B4J1H0 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.94■□□□□ 0.3
Trbv12-1A0A0B4J1H0 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.94■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.94■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.94■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Reep4-203ENSMUST00000226563 1444 ntBASIC16.94■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv12-1A0A0B4J1H0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.93■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.93■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Gm13234-201ENSMUST00000120010 747 ntBASIC16.93■□□□□ 0.3
Trbv12-1A0A0B4J1H0 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Gm18284-201ENSMUST00000172604 624 ntBASIC16.93■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.93■□□□□ 0.3
Trbv12-1A0A0B4J1H0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.93■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.92■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.92■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.91■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv12-1A0A0B4J1H0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.91■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Gm15039-201ENSMUST00000118914 875 ntBASIC16.91■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.91■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv12-1A0A0B4J1H0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.9■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
Trbv12-1A0A0B4J1H0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv12-1A0A0B4J1H0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv12-1A0A0B4J1H0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv12-1A0A0B4J1H0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 155.1 ms