Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ighv1-42A0A0A6YY38 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.73■□□□□ 0.43
Ighv1-42A0A0A6YY38 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ighv1-42A0A0A6YY38 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-42A0A0A6YY38 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-42A0A0A6YY38 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-42A0A0A6YY38 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-42A0A0A6YY38 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-42A0A0A6YY38 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Ighv1-42A0A0A6YY38 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Ighv1-42A0A0A6YY38 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-42A0A0A6YY38 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-42A0A0A6YY38 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-42A0A0A6YY38 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-42A0A0A6YY38 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-42A0A0A6YY38 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-42A0A0A6YY38 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-42A0A0A6YY38 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-42A0A0A6YY38 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-42A0A0A6YY38 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-42A0A0A6YY38 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-42A0A0A6YY38 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.71■□□□□ 0.43
Ighv1-42A0A0A6YY38 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-42A0A0A6YY38 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Ighv1-42A0A0A6YY38 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-42A0A0A6YY38 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.71■□□□□ 0.43
Ighv1-42A0A0A6YY38 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-42A0A0A6YY38 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-42A0A0A6YY38 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-42A0A0A6YY38 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-42A0A0A6YY38 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ighv1-42A0A0A6YY38 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ighv1-42A0A0A6YY38 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ighv1-42A0A0A6YY38 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ighv1-42A0A0A6YY38 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Ighv1-42A0A0A6YY38 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ighv1-42A0A0A6YY38 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.7■□□□□ 0.42
Ighv1-42A0A0A6YY38 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ighv1-42A0A0A6YY38 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.7■□□□□ 0.42
Ighv1-42A0A0A6YY38 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ighv1-42A0A0A6YY38 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ighv1-42A0A0A6YY38 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ighv1-42A0A0A6YY38 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.7■□□□□ 0.42
Ighv1-42A0A0A6YY38 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ighv1-42A0A0A6YY38 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.7■□□□□ 0.42
Ighv1-42A0A0A6YY38 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ighv1-42A0A0A6YY38 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv1-42A0A0A6YY38 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv1-42A0A0A6YY38 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv1-42A0A0A6YY38 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Ighv1-42A0A0A6YY38 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ighv1-42A0A0A6YY38 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv1-42A0A0A6YY38 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv1-42A0A0A6YY38 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ighv1-42A0A0A6YY38 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv1-42A0A0A6YY38 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv1-42A0A0A6YY38 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv1-42A0A0A6YY38 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv1-42A0A0A6YY38 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.69■□□□□ 0.42
Ighv1-42A0A0A6YY38 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv1-42A0A0A6YY38 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv1-42A0A0A6YY38 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv1-42A0A0A6YY38 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv1-42A0A0A6YY38 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv1-42A0A0A6YY38 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.69■□□□□ 0.42
Ighv1-42A0A0A6YY38 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-42A0A0A6YY38 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-42A0A0A6YY38 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-42A0A0A6YY38 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ighv1-42A0A0A6YY38 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-42A0A0A6YY38 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ighv1-42A0A0A6YY38 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-42A0A0A6YY38 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-42A0A0A6YY38 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.68■□□□□ 0.42
Ighv1-42A0A0A6YY38 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ighv1-42A0A0A6YY38 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
Ighv1-42A0A0A6YY38 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-42A0A0A6YY38 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-42A0A0A6YY38 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ighv1-42A0A0A6YY38 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-42A0A0A6YY38 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-42A0A0A6YY38 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-42A0A0A6YY38 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.68■□□□□ 0.42
Ighv1-42A0A0A6YY38 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ighv1-42A0A0A6YY38 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv1-42A0A0A6YY38 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv1-42A0A0A6YY38 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.67■□□□□ 0.42
Ighv1-42A0A0A6YY38 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv1-42A0A0A6YY38 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ighv1-42A0A0A6YY38 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-42A0A0A6YY38 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ighv1-42A0A0A6YY38 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-42A0A0A6YY38 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.66■□□□□ 0.42
Ighv1-42A0A0A6YY38 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Ighv1-42A0A0A6YY38 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ighv1-42A0A0A6YY38 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.66■□□□□ 0.42
Ighv1-42A0A0A6YY38 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
Ighv1-42A0A0A6YY38 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ighv1-42A0A0A6YY38 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-42A0A0A6YY38 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms