Protein–RNA interactions for Protein: A0A0A6YX06

Trbv21, T cell receptor beta, variable 21 (Fragment), mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv21A0A0A6YX06 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv21A0A0A6YX06 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv21A0A0A6YX06 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trbv21A0A0A6YX06 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.73■□□□□ 0.43
Trbv21A0A0A6YX06 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.73■□□□□ 0.43
Trbv21A0A0A6YX06 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv21A0A0A6YX06 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv21A0A0A6YX06 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv21A0A0A6YX06 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv21A0A0A6YX06 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv21A0A0A6YX06 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv21A0A0A6YX06 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv21A0A0A6YX06 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv21A0A0A6YX06 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv21A0A0A6YX06 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv21A0A0A6YX06 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv21A0A0A6YX06 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv21A0A0A6YX06 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Trbv21A0A0A6YX06 Gm43017-201ENSMUST00000198296 752 ntBASIC17.72■□□□□ 0.43
Trbv21A0A0A6YX06 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.72■□□□□ 0.43
Trbv21A0A0A6YX06 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trbv21A0A0A6YX06 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Trbv21A0A0A6YX06 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.72■□□□□ 0.43
Trbv21A0A0A6YX06 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trbv21A0A0A6YX06 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trbv21A0A0A6YX06 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv21A0A0A6YX06 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trbv21A0A0A6YX06 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv21A0A0A6YX06 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trbv21A0A0A6YX06 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.71■□□□□ 0.43
Trbv21A0A0A6YX06 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trbv21A0A0A6YX06 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv21A0A0A6YX06 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trbv21A0A0A6YX06 BC021767-201ENSMUST00000126387 1716 ntBASIC17.71■□□□□ 0.43
Trbv21A0A0A6YX06 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv21A0A0A6YX06 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv21A0A0A6YX06 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv21A0A0A6YX06 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trbv21A0A0A6YX06 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv21A0A0A6YX06 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv21A0A0A6YX06 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv21A0A0A6YX06 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv21A0A0A6YX06 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv21A0A0A6YX06 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.7■□□□□ 0.42
Trbv21A0A0A6YX06 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv21A0A0A6YX06 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv21A0A0A6YX06 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv21A0A0A6YX06 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv21A0A0A6YX06 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv21A0A0A6YX06 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv21A0A0A6YX06 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv21A0A0A6YX06 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv21A0A0A6YX06 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv21A0A0A6YX06 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv21A0A0A6YX06 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv21A0A0A6YX06 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv21A0A0A6YX06 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv21A0A0A6YX06 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv21A0A0A6YX06 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv21A0A0A6YX06 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.69■□□□□ 0.42
Trbv21A0A0A6YX06 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.69■□□□□ 0.42
Trbv21A0A0A6YX06 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv21A0A0A6YX06 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv21A0A0A6YX06 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv21A0A0A6YX06 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Trbv21A0A0A6YX06 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trbv21A0A0A6YX06 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv21A0A0A6YX06 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv21A0A0A6YX06 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv21A0A0A6YX06 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv21A0A0A6YX06 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv21A0A0A6YX06 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv21A0A0A6YX06 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv21A0A0A6YX06 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Trbv21A0A0A6YX06 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Trbv21A0A0A6YX06 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.68■□□□□ 0.42
Trbv21A0A0A6YX06 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Trbv21A0A0A6YX06 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.68■□□□□ 0.42
Trbv21A0A0A6YX06 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv21A0A0A6YX06 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv21A0A0A6YX06 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv21A0A0A6YX06 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv21A0A0A6YX06 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv21A0A0A6YX06 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv21A0A0A6YX06 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv21A0A0A6YX06 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv21A0A0A6YX06 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Trbv21A0A0A6YX06 Gm7860-201ENSMUST00000121190 879 ntBASIC17.67■□□□□ 0.42
Trbv21A0A0A6YX06 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.67■□□□□ 0.42
Trbv21A0A0A6YX06 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv21A0A0A6YX06 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trbv21A0A0A6YX06 Gm40848-201ENSMUST00000221998 324 ntBASIC17.67■□□□□ 0.42
Trbv21A0A0A6YX06 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv21A0A0A6YX06 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv21A0A0A6YX06 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trbv21A0A0A6YX06 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv21A0A0A6YX06 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv21A0A0A6YX06 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trbv21A0A0A6YX06 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv21A0A0A6YX06 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms