Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
Trbc1A0A0A6YWV4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.54■□□□□ 0.4
Trbc1A0A0A6YWV4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbc1A0A0A6YWV4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbc1A0A0A6YWV4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbc1A0A0A6YWV4 Golph3-205ENSMUST00000228671 2842 ntBASIC17.54■□□□□ 0.4
Trbc1A0A0A6YWV4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trbc1A0A0A6YWV4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trbc1A0A0A6YWV4 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trbc1A0A0A6YWV4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trbc1A0A0A6YWV4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbc1A0A0A6YWV4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.53■□□□□ 0.4
Trbc1A0A0A6YWV4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbc1A0A0A6YWV4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.53■□□□□ 0.4
Trbc1A0A0A6YWV4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbc1A0A0A6YWV4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbc1A0A0A6YWV4 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbc1A0A0A6YWV4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trbc1A0A0A6YWV4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbc1A0A0A6YWV4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbc1A0A0A6YWV4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbc1A0A0A6YWV4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbc1A0A0A6YWV4 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbc1A0A0A6YWV4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbc1A0A0A6YWV4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.52■□□□□ 0.4
Trbc1A0A0A6YWV4 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbc1A0A0A6YWV4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbc1A0A0A6YWV4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.52■□□□□ 0.4
Trbc1A0A0A6YWV4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbc1A0A0A6YWV4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbc1A0A0A6YWV4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbc1A0A0A6YWV4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trbc1A0A0A6YWV4 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trbc1A0A0A6YWV4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trbc1A0A0A6YWV4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbc1A0A0A6YWV4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbc1A0A0A6YWV4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trbc1A0A0A6YWV4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbc1A0A0A6YWV4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbc1A0A0A6YWV4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbc1A0A0A6YWV4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trbc1A0A0A6YWV4 Gm8495-201ENSMUST00000188740 694 ntBASIC17.51■□□□□ 0.39
Trbc1A0A0A6YWV4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbc1A0A0A6YWV4 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.51■□□□□ 0.39
Trbc1A0A0A6YWV4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbc1A0A0A6YWV4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbc1A0A0A6YWV4 Gm10493-201ENSMUST00000097270 612 ntBASIC17.51■□□□□ 0.39
Trbc1A0A0A6YWV4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trbc1A0A0A6YWV4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trbc1A0A0A6YWV4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbc1A0A0A6YWV4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Trbc1A0A0A6YWV4 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbc1A0A0A6YWV4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trbc1A0A0A6YWV4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbc1A0A0A6YWV4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbc1A0A0A6YWV4 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbc1A0A0A6YWV4 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbc1A0A0A6YWV4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbc1A0A0A6YWV4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.5■□□□□ 0.39
Trbc1A0A0A6YWV4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbc1A0A0A6YWV4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbc1A0A0A6YWV4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbc1A0A0A6YWV4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbc1A0A0A6YWV4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbc1A0A0A6YWV4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbc1A0A0A6YWV4 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trbc1A0A0A6YWV4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbc1A0A0A6YWV4 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.49■□□□□ 0.39
Trbc1A0A0A6YWV4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbc1A0A0A6YWV4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Trbc1A0A0A6YWV4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbc1A0A0A6YWV4 Gm5874-201ENSMUST00000096101 508 ntBASIC17.49■□□□□ 0.39
Trbc1A0A0A6YWV4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbc1A0A0A6YWV4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbc1A0A0A6YWV4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbc1A0A0A6YWV4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbc1A0A0A6YWV4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trbc1A0A0A6YWV4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Trbc1A0A0A6YWV4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trbc1A0A0A6YWV4 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.48■□□□□ 0.39
Trbc1A0A0A6YWV4 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.48■□□□□ 0.39
Trbc1A0A0A6YWV4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.48■□□□□ 0.39
Trbc1A0A0A6YWV4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trbc1A0A0A6YWV4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbc1A0A0A6YWV4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trbc1A0A0A6YWV4 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.48■□□□□ 0.39
Trbc1A0A0A6YWV4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trbc1A0A0A6YWV4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbc1A0A0A6YWV4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.48■□□□□ 0.39
Trbc1A0A0A6YWV4 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbc1A0A0A6YWV4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trbc1A0A0A6YWV4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbc1A0A0A6YWV4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbc1A0A0A6YWV4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Trbc1A0A0A6YWV4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbc1A0A0A6YWV4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbc1A0A0A6YWV4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trbc1A0A0A6YWV4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbc1A0A0A6YWV4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trbc1A0A0A6YWV4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms