Protein–RNA interactions for Protein: A0A087WQQ0

Gm28557, Predicted gene 28557, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28557A0A087WQQ0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm28557A0A087WQQ0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm28557A0A087WQQ0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm28557A0A087WQQ0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm28557A0A087WQQ0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm28557A0A087WQQ0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.18■□□□□ 0.34
Gm28557A0A087WQQ0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm28557A0A087WQQ0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm28557A0A087WQQ0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm28557A0A087WQQ0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm28557A0A087WQQ0 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.18■□□□□ 0.34
Gm28557A0A087WQQ0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm28557A0A087WQQ0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm28557A0A087WQQ0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm28557A0A087WQQ0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gm28557A0A087WQQ0 Grk6-206ENSMUST00000224995 2971 ntBASIC17.17■□□□□ 0.34
Gm28557A0A087WQQ0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm28557A0A087WQQ0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm28557A0A087WQQ0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm28557A0A087WQQ0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gm28557A0A087WQQ0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm28557A0A087WQQ0 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.17■□□□□ 0.34
Gm28557A0A087WQQ0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm28557A0A087WQQ0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Gm28557A0A087WQQ0 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.17■□□□□ 0.34
Gm28557A0A087WQQ0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm28557A0A087WQQ0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.16■□□□□ 0.34
Gm28557A0A087WQQ0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.16■□□□□ 0.34
Gm28557A0A087WQQ0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.16■□□□□ 0.34
Gm28557A0A087WQQ0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm28557A0A087WQQ0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm28557A0A087WQQ0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
Gm28557A0A087WQQ0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm28557A0A087WQQ0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.16■□□□□ 0.34
Gm28557A0A087WQQ0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Gm28557A0A087WQQ0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm28557A0A087WQQ0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm28557A0A087WQQ0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm28557A0A087WQQ0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm28557A0A087WQQ0 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.15■□□□□ 0.34
Gm28557A0A087WQQ0 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.15■□□□□ 0.34
Gm28557A0A087WQQ0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm28557A0A087WQQ0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm28557A0A087WQQ0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Gm28557A0A087WQQ0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Gm28557A0A087WQQ0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm28557A0A087WQQ0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm28557A0A087WQQ0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm28557A0A087WQQ0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm28557A0A087WQQ0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm28557A0A087WQQ0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Gm28557A0A087WQQ0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Gm28557A0A087WQQ0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28557A0A087WQQ0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28557A0A087WQQ0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Gm28557A0A087WQQ0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Gm28557A0A087WQQ0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.14■□□□□ 0.33
Gm28557A0A087WQQ0 Gm22238-201ENSMUST00000175222 88 ntBASIC17.14■□□□□ 0.33
Gm28557A0A087WQQ0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.14■□□□□ 0.33
Gm28557A0A087WQQ0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.14■□□□□ 0.33
Gm28557A0A087WQQ0 Serp2-204ENSMUST00000228055 705 ntBASIC17.14■□□□□ 0.33
Gm28557A0A087WQQ0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28557A0A087WQQ0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28557A0A087WQQ0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28557A0A087WQQ0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28557A0A087WQQ0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28557A0A087WQQ0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28557A0A087WQQ0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28557A0A087WQQ0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28557A0A087WQQ0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28557A0A087WQQ0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28557A0A087WQQ0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Gm28557A0A087WQQ0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.13■□□□□ 0.33
Gm28557A0A087WQQ0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28557A0A087WQQ0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28557A0A087WQQ0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28557A0A087WQQ0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Gm28557A0A087WQQ0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28557A0A087WQQ0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28557A0A087WQQ0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28557A0A087WQQ0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28557A0A087WQQ0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.12■□□□□ 0.33
Gm28557A0A087WQQ0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28557A0A087WQQ0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Gm28557A0A087WQQ0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28557A0A087WQQ0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gm28557A0A087WQQ0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28557A0A087WQQ0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28557A0A087WQQ0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28557A0A087WQQ0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28557A0A087WQQ0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28557A0A087WQQ0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28557A0A087WQQ0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28557A0A087WQQ0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28557A0A087WQQ0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28557A0A087WQQ0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28557A0A087WQQ0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28557A0A087WQQ0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28557A0A087WQQ0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Gm28557A0A087WQQ0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms