Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-4A0A075B6B4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trav6-4A0A075B6B4 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.73□□□□□ -0.05
Trav6-4A0A075B6B4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-4A0A075B6B4 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-4A0A075B6B4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-4A0A075B6B4 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav6-4A0A075B6B4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-4A0A075B6B4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-4A0A075B6B4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-4A0A075B6B4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-4A0A075B6B4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-4A0A075B6B4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-4A0A075B6B4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-4A0A075B6B4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav6-4A0A075B6B4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-4A0A075B6B4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-4A0A075B6B4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-4A0A075B6B4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.72□□□□□ -0.05
Trav6-4A0A075B6B4 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Trav6-4A0A075B6B4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav6-4A0A075B6B4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.72□□□□□ -0.05
Trav6-4A0A075B6B4 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-4A0A075B6B4 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-4A0A075B6B4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-4A0A075B6B4 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav6-4A0A075B6B4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-4A0A075B6B4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-4A0A075B6B4 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-4A0A075B6B4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav6-4A0A075B6B4 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-4A0A075B6B4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-4A0A075B6B4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.05
Trav6-4A0A075B6B4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-4A0A075B6B4 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-4A0A075B6B4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6-4A0A075B6B4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.06
Trav6-4A0A075B6B4 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Trav6-4A0A075B6B4 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-4A0A075B6B4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav6-4A0A075B6B4 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-4A0A075B6B4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-4A0A075B6B4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Trav6-4A0A075B6B4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.7□□□□□ -0.06
Trav6-4A0A075B6B4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-4A0A075B6B4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trav6-4A0A075B6B4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-4A0A075B6B4 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-4A0A075B6B4 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trav6-4A0A075B6B4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-4A0A075B6B4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-4A0A075B6B4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-4A0A075B6B4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-4A0A075B6B4 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-4A0A075B6B4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-4A0A075B6B4 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-4A0A075B6B4 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-4A0A075B6B4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-4A0A075B6B4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav6-4A0A075B6B4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-4A0A075B6B4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-4A0A075B6B4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-4A0A075B6B4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav6-4A0A075B6B4 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav6-4A0A075B6B4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-4A0A075B6B4 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-4A0A075B6B4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-4A0A075B6B4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-4A0A075B6B4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-4A0A075B6B4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-4A0A075B6B4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-4A0A075B6B4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
Trav6-4A0A075B6B4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.68□□□□□ -0.06
Trav6-4A0A075B6B4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-4A0A075B6B4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-4A0A075B6B4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-4A0A075B6B4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-4A0A075B6B4 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC14.68□□□□□ -0.06
Trav6-4A0A075B6B4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-4A0A075B6B4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-4A0A075B6B4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Trav6-4A0A075B6B4 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav6-4A0A075B6B4 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav6-4A0A075B6B4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-4A0A075B6B4 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-4A0A075B6B4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-4A0A075B6B4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav6-4A0A075B6B4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-4A0A075B6B4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-4A0A075B6B4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-4A0A075B6B4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.67□□□□□ -0.06
Trav6-4A0A075B6B4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-4A0A075B6B4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-4A0A075B6B4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Trav6-4A0A075B6B4 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-4A0A075B6B4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-4A0A075B6B4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav6-4A0A075B6B4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-4A0A075B6B4 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav6-4A0A075B6B4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms