Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9d-3A0A075B695 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9d-3A0A075B695 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Trav9d-3A0A075B695 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9d-3A0A075B695 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9d-3A0A075B695 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Trav9d-3A0A075B695 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9d-3A0A075B695 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9d-3A0A075B695 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC13.62□□□□□ -0.23
Trav9d-3A0A075B695 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9d-3A0A075B695 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trav9d-3A0A075B695 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav9d-3A0A075B695 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9d-3A0A075B695 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9d-3A0A075B695 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9d-3A0A075B695 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9d-3A0A075B695 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9d-3A0A075B695 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9d-3A0A075B695 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9d-3A0A075B695 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9d-3A0A075B695 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9d-3A0A075B695 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9d-3A0A075B695 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9d-3A0A075B695 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9d-3A0A075B695 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9d-3A0A075B695 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
Trav9d-3A0A075B695 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9d-3A0A075B695 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9d-3A0A075B695 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav9d-3A0A075B695 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav9d-3A0A075B695 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9d-3A0A075B695 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9d-3A0A075B695 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9d-3A0A075B695 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9d-3A0A075B695 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9d-3A0A075B695 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Trav9d-3A0A075B695 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9d-3A0A075B695 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9d-3A0A075B695 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav9d-3A0A075B695 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9d-3A0A075B695 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav9d-3A0A075B695 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9d-3A0A075B695 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav9d-3A0A075B695 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9d-3A0A075B695 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav9d-3A0A075B695 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9d-3A0A075B695 AC154266.1-201ENSMUST00000223190 503 ntBASIC13.6□□□□□ -0.23
Trav9d-3A0A075B695 Spcs1-204ENSMUST00000226782 949 ntBASIC13.6□□□□□ -0.23
Trav9d-3A0A075B695 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9d-3A0A075B695 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Trav9d-3A0A075B695 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Trav9d-3A0A075B695 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9d-3A0A075B695 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav9d-3A0A075B695 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9d-3A0A075B695 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav9d-3A0A075B695 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9d-3A0A075B695 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Trav9d-3A0A075B695 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9d-3A0A075B695 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9d-3A0A075B695 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9d-3A0A075B695 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9d-3A0A075B695 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9d-3A0A075B695 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC13.59□□□□□ -0.23
Trav9d-3A0A075B695 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav9d-3A0A075B695 Gm42911-201ENSMUST00000199360 1630 ntBASIC13.59□□□□□ -0.23
Trav9d-3A0A075B695 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9d-3A0A075B695 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav9d-3A0A075B695 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Trav9d-3A0A075B695 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9d-3A0A075B695 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9d-3A0A075B695 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9d-3A0A075B695 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav9d-3A0A075B695 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9d-3A0A075B695 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav9d-3A0A075B695 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav9d-3A0A075B695 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9d-3A0A075B695 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9d-3A0A075B695 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9d-3A0A075B695 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9d-3A0A075B695 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trav9d-3A0A075B695 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav9d-3A0A075B695 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9d-3A0A075B695 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9d-3A0A075B695 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9d-3A0A075B695 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9d-3A0A075B695 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9d-3A0A075B695 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9d-3A0A075B695 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9d-3A0A075B695 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9d-3A0A075B695 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9d-3A0A075B695 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9d-3A0A075B695 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9d-3A0A075B695 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9d-3A0A075B695 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav9d-3A0A075B695 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9d-3A0A075B695 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC13.57□□□□□ -0.24
Trav9d-3A0A075B695 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9d-3A0A075B695 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Trav9d-3A0A075B695 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9d-3A0A075B695 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms