Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav5-4A0A075B652 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav5-4A0A075B652 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav5-4A0A075B652 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Trav5-4A0A075B652 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav5-4A0A075B652 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav5-4A0A075B652 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav5-4A0A075B652 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav5-4A0A075B652 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav5-4A0A075B652 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav5-4A0A075B652 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav5-4A0A075B652 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trav5-4A0A075B652 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trav5-4A0A075B652 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav5-4A0A075B652 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav5-4A0A075B652 Rarb-207ENSMUST00000225921 2756 ntBASIC15.88■□□□□ 0.13
Trav5-4A0A075B652 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav5-4A0A075B652 Gm43137-201ENSMUST00000198052 594 ntBASIC15.88■□□□□ 0.13
Trav5-4A0A075B652 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav5-4A0A075B652 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trav5-4A0A075B652 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC15.88■□□□□ 0.13
Trav5-4A0A075B652 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trav5-4A0A075B652 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav5-4A0A075B652 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav5-4A0A075B652 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav5-4A0A075B652 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav5-4A0A075B652 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav5-4A0A075B652 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trav5-4A0A075B652 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav5-4A0A075B652 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav5-4A0A075B652 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav5-4A0A075B652 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.87■□□□□ 0.13
Trav5-4A0A075B652 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trav5-4A0A075B652 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Trav5-4A0A075B652 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.87■□□□□ 0.13
Trav5-4A0A075B652 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav5-4A0A075B652 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trav5-4A0A075B652 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav5-4A0A075B652 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav5-4A0A075B652 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav5-4A0A075B652 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav5-4A0A075B652 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav5-4A0A075B652 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Trav5-4A0A075B652 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav5-4A0A075B652 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
Trav5-4A0A075B652 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav5-4A0A075B652 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav5-4A0A075B652 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav5-4A0A075B652 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.86■□□□□ 0.13
Trav5-4A0A075B652 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav5-4A0A075B652 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav5-4A0A075B652 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5-4A0A075B652 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5-4A0A075B652 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5-4A0A075B652 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5-4A0A075B652 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5-4A0A075B652 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5-4A0A075B652 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5-4A0A075B652 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5-4A0A075B652 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav5-4A0A075B652 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.85■□□□□ 0.13
Trav5-4A0A075B652 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5-4A0A075B652 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5-4A0A075B652 Gm13241-201ENSMUST00000094493 780 ntBASIC15.85■□□□□ 0.13
Trav5-4A0A075B652 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.85■□□□□ 0.13
Trav5-4A0A075B652 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5-4A0A075B652 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5-4A0A075B652 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5-4A0A075B652 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5-4A0A075B652 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trav5-4A0A075B652 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5-4A0A075B652 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5-4A0A075B652 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5-4A0A075B652 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav5-4A0A075B652 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trav5-4A0A075B652 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trav5-4A0A075B652 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.84■□□□□ 0.13
Trav5-4A0A075B652 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5-4A0A075B652 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5-4A0A075B652 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.84■□□□□ 0.13
Trav5-4A0A075B652 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC15.84■□□□□ 0.13
Trav5-4A0A075B652 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.84■□□□□ 0.13
Trav5-4A0A075B652 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5-4A0A075B652 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav5-4A0A075B652 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trav5-4A0A075B652 Serp2-204ENSMUST00000228055 705 ntBASIC15.84■□□□□ 0.13
Trav5-4A0A075B652 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trav5-4A0A075B652 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5-4A0A075B652 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5-4A0A075B652 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
Trav5-4A0A075B652 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trav5-4A0A075B652 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5-4A0A075B652 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Trav5-4A0A075B652 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5-4A0A075B652 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trav5-4A0A075B652 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav5-4A0A075B652 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trav5-4A0A075B652 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav5-4A0A075B652 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.83■□□□□ 0.12
Trav5-4A0A075B652 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms