Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5-1A0A075B5Z7 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trav5-1A0A075B5Z7 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5-1A0A075B5Z7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5-1A0A075B5Z7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5-1A0A075B5Z7 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav5-1A0A075B5Z7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
Trav5-1A0A075B5Z7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5-1A0A075B5Z7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5-1A0A075B5Z7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.45■□□□□ 0.22
Trav5-1A0A075B5Z7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.45■□□□□ 0.22
Trav5-1A0A075B5Z7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5-1A0A075B5Z7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trav5-1A0A075B5Z7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Trav5-1A0A075B5Z7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5-1A0A075B5Z7 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5-1A0A075B5Z7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5-1A0A075B5Z7 Gm37179-201ENSMUST00000194862 823 ntBASIC16.45■□□□□ 0.22
Trav5-1A0A075B5Z7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.45■□□□□ 0.22
Trav5-1A0A075B5Z7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5-1A0A075B5Z7 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5-1A0A075B5Z7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trav5-1A0A075B5Z7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5-1A0A075B5Z7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5-1A0A075B5Z7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5-1A0A075B5Z7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trav5-1A0A075B5Z7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav5-1A0A075B5Z7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav5-1A0A075B5Z7 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav5-1A0A075B5Z7 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.44■□□□□ 0.22
Trav5-1A0A075B5Z7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.44■□□□□ 0.22
Trav5-1A0A075B5Z7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav5-1A0A075B5Z7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav5-1A0A075B5Z7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav5-1A0A075B5Z7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav5-1A0A075B5Z7 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.43■□□□□ 0.22
Trav5-1A0A075B5Z7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trav5-1A0A075B5Z7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav5-1A0A075B5Z7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav5-1A0A075B5Z7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav5-1A0A075B5Z7 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trav5-1A0A075B5Z7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trav5-1A0A075B5Z7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav5-1A0A075B5Z7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav5-1A0A075B5Z7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trav5-1A0A075B5Z7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav5-1A0A075B5Z7 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.42■□□□□ 0.22
Trav5-1A0A075B5Z7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav5-1A0A075B5Z7 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav5-1A0A075B5Z7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav5-1A0A075B5Z7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav5-1A0A075B5Z7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.42■□□□□ 0.22
Trav5-1A0A075B5Z7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.42■□□□□ 0.22
Trav5-1A0A075B5Z7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav5-1A0A075B5Z7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.42■□□□□ 0.22
Trav5-1A0A075B5Z7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trav5-1A0A075B5Z7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav5-1A0A075B5Z7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav5-1A0A075B5Z7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav5-1A0A075B5Z7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav5-1A0A075B5Z7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav5-1A0A075B5Z7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trav5-1A0A075B5Z7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav5-1A0A075B5Z7 Gm13534-201ENSMUST00000121169 513 ntBASIC16.41■□□□□ 0.22
Trav5-1A0A075B5Z7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.41■□□□□ 0.22
Trav5-1A0A075B5Z7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.41■□□□□ 0.22
Trav5-1A0A075B5Z7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav5-1A0A075B5Z7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav5-1A0A075B5Z7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav5-1A0A075B5Z7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav5-1A0A075B5Z7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav5-1A0A075B5Z7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav5-1A0A075B5Z7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trav5-1A0A075B5Z7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trav5-1A0A075B5Z7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav5-1A0A075B5Z7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav5-1A0A075B5Z7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trav5-1A0A075B5Z7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav5-1A0A075B5Z7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav5-1A0A075B5Z7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Trav5-1A0A075B5Z7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.4■□□□□ 0.22
Trav5-1A0A075B5Z7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trav5-1A0A075B5Z7 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav5-1A0A075B5Z7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav5-1A0A075B5Z7 Gm12933-201ENSMUST00000120203 872 ntBASIC16.4■□□□□ 0.22
Trav5-1A0A075B5Z7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav5-1A0A075B5Z7 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trav5-1A0A075B5Z7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Trav5-1A0A075B5Z7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trav5-1A0A075B5Z7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Trav5-1A0A075B5Z7 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav5-1A0A075B5Z7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav5-1A0A075B5Z7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trav5-1A0A075B5Z7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav5-1A0A075B5Z7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Trav5-1A0A075B5Z7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav5-1A0A075B5Z7 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav5-1A0A075B5Z7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav5-1A0A075B5Z7 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trav5-1A0A075B5Z7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms