Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Mir6236-201ENSMUST00000184437 123 ntBASIC19.44■□□□□ 0.7
Speer3W4VSP1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.44■□□□□ 0.7
Speer3W4VSP1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Speer3W4VSP1 Gm9847-201ENSMUST00000052528 599 ntBASIC19.44■□□□□ 0.7
Speer3W4VSP1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
Speer3W4VSP1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Speer3W4VSP1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Speer3W4VSP1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
Speer3W4VSP1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Speer3W4VSP1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.44■□□□□ 0.7
Speer3W4VSP1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.44■□□□□ 0.7
Speer3W4VSP1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Speer3W4VSP1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Speer3W4VSP1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Speer3W4VSP1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Speer3W4VSP1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.43■□□□□ 0.7
Speer3W4VSP1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Speer3W4VSP1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.43■□□□□ 0.7
Speer3W4VSP1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Speer3W4VSP1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Speer3W4VSP1 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.43■□□□□ 0.7
Speer3W4VSP1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Speer3W4VSP1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Speer3W4VSP1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Speer3W4VSP1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Speer3W4VSP1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Speer3W4VSP1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Speer3W4VSP1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
Speer3W4VSP1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Speer3W4VSP1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Speer3W4VSP1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.42■□□□□ 0.7
Speer3W4VSP1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Speer3W4VSP1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Speer3W4VSP1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.42■□□□□ 0.7
Speer3W4VSP1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Speer3W4VSP1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Speer3W4VSP1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Speer3W4VSP1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Speer3W4VSP1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Speer3W4VSP1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Speer3W4VSP1 Golgb1-201ENSMUST00000023534 498 ntBASIC19.41■□□□□ 0.7
Speer3W4VSP1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Speer3W4VSP1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Speer3W4VSP1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Speer3W4VSP1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.41■□□□□ 0.7
Speer3W4VSP1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Speer3W4VSP1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Speer3W4VSP1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Speer3W4VSP1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Speer3W4VSP1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Speer3W4VSP1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Speer3W4VSP1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Speer3W4VSP1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Speer3W4VSP1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Speer3W4VSP1 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.4■□□□□ 0.7
Speer3W4VSP1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.4■□□□□ 0.7
Speer3W4VSP1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Speer3W4VSP1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Speer3W4VSP1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Speer3W4VSP1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Speer3W4VSP1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.39■□□□□ 0.7
Speer3W4VSP1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Speer3W4VSP1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Speer3W4VSP1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Speer3W4VSP1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Speer3W4VSP1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Speer3W4VSP1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Speer3W4VSP1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.39■□□□□ 0.69
Speer3W4VSP1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Speer3W4VSP1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Speer3W4VSP1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Speer3W4VSP1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.38■□□□□ 0.69
Speer3W4VSP1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Speer3W4VSP1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Speer3W4VSP1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Speer3W4VSP1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Speer3W4VSP1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Speer3W4VSP1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Speer3W4VSP1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Speer3W4VSP1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Speer3W4VSP1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Speer3W4VSP1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Speer3W4VSP1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Speer3W4VSP1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
Speer3W4VSP1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Speer3W4VSP1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Speer3W4VSP1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Speer3W4VSP1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Speer3W4VSP1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Speer3W4VSP1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Speer3W4VSP1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Speer3W4VSP1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Speer3W4VSP1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Speer3W4VSP1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Speer3W4VSP1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Speer3W4VSP1 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.36■□□□□ 0.69
Speer3W4VSP1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.36■□□□□ 0.69
Speer3W4VSP1 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.36■□□□□ 0.69
Speer3W4VSP1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Speer3W4VSP1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms