Protein–RNA interactions for Protein: S4R1W1

Gm3839, Glyceraldehyde-3-phosphate dehydrogenase, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3839S4R1W1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3839S4R1W1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.15■□□□□ 0.34
Gm3839S4R1W1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3839S4R1W1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3839S4R1W1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3839S4R1W1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3839S4R1W1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Gm3839S4R1W1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Gm3839S4R1W1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3839S4R1W1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3839S4R1W1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3839S4R1W1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3839S4R1W1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3839S4R1W1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Gm3839S4R1W1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3839S4R1W1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3839S4R1W1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Gm3839S4R1W1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3839S4R1W1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3839S4R1W1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3839S4R1W1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3839S4R1W1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Gm3839S4R1W1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.13■□□□□ 0.33
Gm3839S4R1W1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3839S4R1W1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Gm3839S4R1W1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3839S4R1W1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3839S4R1W1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3839S4R1W1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3839S4R1W1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3839S4R1W1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3839S4R1W1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3839S4R1W1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.12■□□□□ 0.33
Gm3839S4R1W1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.12■□□□□ 0.33
Gm3839S4R1W1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3839S4R1W1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Gm3839S4R1W1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3839S4R1W1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3839S4R1W1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3839S4R1W1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3839S4R1W1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3839S4R1W1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3839S4R1W1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Gm3839S4R1W1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Gm3839S4R1W1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.12■□□□□ 0.33
Gm3839S4R1W1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3839S4R1W1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3839S4R1W1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm3839S4R1W1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3839S4R1W1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Gm3839S4R1W1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3839S4R1W1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3839S4R1W1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3839S4R1W1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3839S4R1W1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3839S4R1W1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3839S4R1W1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Gm3839S4R1W1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3839S4R1W1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Gm3839S4R1W1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3839S4R1W1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.1■□□□□ 0.33
Gm3839S4R1W1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3839S4R1W1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3839S4R1W1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3839S4R1W1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3839S4R1W1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3839S4R1W1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3839S4R1W1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Gm3839S4R1W1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3839S4R1W1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3839S4R1W1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3839S4R1W1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Gm3839S4R1W1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.09■□□□□ 0.33
Gm3839S4R1W1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.09■□□□□ 0.33
Gm3839S4R1W1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3839S4R1W1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Gm3839S4R1W1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Gm3839S4R1W1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3839S4R1W1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.09■□□□□ 0.33
Gm3839S4R1W1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3839S4R1W1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Gm3839S4R1W1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.08■□□□□ 0.33
Gm3839S4R1W1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm3839S4R1W1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3839S4R1W1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3839S4R1W1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.08■□□□□ 0.32
Gm3839S4R1W1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.08■□□□□ 0.32
Gm3839S4R1W1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3839S4R1W1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.08■□□□□ 0.32
Gm3839S4R1W1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3839S4R1W1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3839S4R1W1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3839S4R1W1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3839S4R1W1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3839S4R1W1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3839S4R1W1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Gm3839S4R1W1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3839S4R1W1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3839S4R1W1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3839S4R1W1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms