Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
H2afb2S4R1M3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
H2afb2S4R1M3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
H2afb2S4R1M3 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
H2afb2S4R1M3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
H2afb2S4R1M3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
H2afb2S4R1M3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
H2afb2S4R1M3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
H2afb2S4R1M3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
H2afb2S4R1M3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
H2afb2S4R1M3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
H2afb2S4R1M3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
H2afb2S4R1M3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
H2afb2S4R1M3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
H2afb2S4R1M3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
H2afb2S4R1M3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
H2afb2S4R1M3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
H2afb2S4R1M3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
H2afb2S4R1M3 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
H2afb2S4R1M3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
H2afb2S4R1M3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
H2afb2S4R1M3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
H2afb2S4R1M3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
H2afb2S4R1M3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
H2afb2S4R1M3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
H2afb2S4R1M3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
H2afb2S4R1M3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
H2afb2S4R1M3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
H2afb2S4R1M3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
H2afb2S4R1M3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
H2afb2S4R1M3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
H2afb2S4R1M3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
H2afb2S4R1M3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
H2afb2S4R1M3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
H2afb2S4R1M3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
H2afb2S4R1M3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
H2afb2S4R1M3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
H2afb2S4R1M3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.15■□□□□ 0.66
H2afb2S4R1M3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.15■□□□□ 0.66
H2afb2S4R1M3 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
H2afb2S4R1M3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
H2afb2S4R1M3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
H2afb2S4R1M3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
H2afb2S4R1M3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
H2afb2S4R1M3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
H2afb2S4R1M3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
H2afb2S4R1M3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
H2afb2S4R1M3 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
H2afb2S4R1M3 Gm43017-201ENSMUST00000198296 752 ntBASIC19.14■□□□□ 0.65
H2afb2S4R1M3 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.14■□□□□ 0.65
H2afb2S4R1M3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
H2afb2S4R1M3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
H2afb2S4R1M3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
H2afb2S4R1M3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
H2afb2S4R1M3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
H2afb2S4R1M3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
H2afb2S4R1M3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
H2afb2S4R1M3 Gm26833-201ENSMUST00000180899 440 ntBASIC19.13■□□□□ 0.65
H2afb2S4R1M3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.13■□□□□ 0.65
H2afb2S4R1M3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
H2afb2S4R1M3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
H2afb2S4R1M3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
H2afb2S4R1M3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
H2afb2S4R1M3 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.13■□□□□ 0.65
H2afb2S4R1M3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.13■□□□□ 0.65
H2afb2S4R1M3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
H2afb2S4R1M3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
H2afb2S4R1M3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
H2afb2S4R1M3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
H2afb2S4R1M3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
H2afb2S4R1M3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
H2afb2S4R1M3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
H2afb2S4R1M3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
H2afb2S4R1M3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
H2afb2S4R1M3 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.12■□□□□ 0.65
H2afb2S4R1M3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
H2afb2S4R1M3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
H2afb2S4R1M3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
H2afb2S4R1M3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
H2afb2S4R1M3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
H2afb2S4R1M3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
H2afb2S4R1M3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
H2afb2S4R1M3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
H2afb2S4R1M3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
H2afb2S4R1M3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.11■□□□□ 0.65
H2afb2S4R1M3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.11■□□□□ 0.65
H2afb2S4R1M3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
H2afb2S4R1M3 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
H2afb2S4R1M3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
H2afb2S4R1M3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
H2afb2S4R1M3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
H2afb2S4R1M3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
H2afb2S4R1M3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
H2afb2S4R1M3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
H2afb2S4R1M3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
H2afb2S4R1M3 Gm27801-201ENSMUST00000184174 223 ntBASIC19.1■□□□□ 0.65
H2afb2S4R1M3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
H2afb2S4R1M3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
H2afb2S4R1M3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
H2afb2S4R1M3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms