Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Crlf3Q9Z2L7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Crlf3Q9Z2L7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.69
Crlf3Q9Z2L7 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Crlf3Q9Z2L7 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Crlf3Q9Z2L7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.33■□□□□ 0.69
Crlf3Q9Z2L7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Crlf3Q9Z2L7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Crlf3Q9Z2L7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Crlf3Q9Z2L7 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Crlf3Q9Z2L7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Crlf3Q9Z2L7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Crlf3Q9Z2L7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Crlf3Q9Z2L7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Crlf3Q9Z2L7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
Crlf3Q9Z2L7 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Crlf3Q9Z2L7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Crlf3Q9Z2L7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Crlf3Q9Z2L7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Crlf3Q9Z2L7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Crlf3Q9Z2L7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Crlf3Q9Z2L7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Crlf3Q9Z2L7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Crlf3Q9Z2L7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Crlf3Q9Z2L7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.31■□□□□ 0.68
Crlf3Q9Z2L7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Crlf3Q9Z2L7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Crlf3Q9Z2L7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Crlf3Q9Z2L7 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Crlf3Q9Z2L7 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.31■□□□□ 0.68
Crlf3Q9Z2L7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Crlf3Q9Z2L7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Crlf3Q9Z2L7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Crlf3Q9Z2L7 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Crlf3Q9Z2L7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Crlf3Q9Z2L7 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.31■□□□□ 0.68
Crlf3Q9Z2L7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Crlf3Q9Z2L7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Crlf3Q9Z2L7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Crlf3Q9Z2L7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Crlf3Q9Z2L7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Crlf3Q9Z2L7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Crlf3Q9Z2L7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.3■□□□□ 0.68
Crlf3Q9Z2L7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Crlf3Q9Z2L7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.3■□□□□ 0.68
Crlf3Q9Z2L7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Crlf3Q9Z2L7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Crlf3Q9Z2L7 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.3■□□□□ 0.68
Crlf3Q9Z2L7 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Crlf3Q9Z2L7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Crlf3Q9Z2L7 AA386476-201ENSMUST00000098781 1665 ntBASIC19.3■□□□□ 0.68
Crlf3Q9Z2L7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Crlf3Q9Z2L7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Crlf3Q9Z2L7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Crlf3Q9Z2L7 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Crlf3Q9Z2L7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Crlf3Q9Z2L7 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Crlf3Q9Z2L7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Crlf3Q9Z2L7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Crlf3Q9Z2L7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.29■□□□□ 0.68
Crlf3Q9Z2L7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.29■□□□□ 0.68
Crlf3Q9Z2L7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Crlf3Q9Z2L7 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Crlf3Q9Z2L7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Crlf3Q9Z2L7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Crlf3Q9Z2L7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Crlf3Q9Z2L7 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.28■□□□□ 0.68
Crlf3Q9Z2L7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.28■□□□□ 0.68
Crlf3Q9Z2L7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Crlf3Q9Z2L7 Gm22238-201ENSMUST00000175222 88 ntBASIC19.28■□□□□ 0.68
Crlf3Q9Z2L7 Gm9870-201ENSMUST00000063874 645 ntBASIC19.28■□□□□ 0.68
Crlf3Q9Z2L7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Crlf3Q9Z2L7 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.28■□□□□ 0.68
Crlf3Q9Z2L7 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Crlf3Q9Z2L7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Crlf3Q9Z2L7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Crlf3Q9Z2L7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Crlf3Q9Z2L7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Crlf3Q9Z2L7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Crlf3Q9Z2L7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Crlf3Q9Z2L7 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Crlf3Q9Z2L7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Crlf3Q9Z2L7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Crlf3Q9Z2L7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.27■□□□□ 0.68
Crlf3Q9Z2L7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Crlf3Q9Z2L7 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Crlf3Q9Z2L7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Crlf3Q9Z2L7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Crlf3Q9Z2L7 BC021767-201ENSMUST00000126387 1716 ntBASIC19.27■□□□□ 0.68
Crlf3Q9Z2L7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Crlf3Q9Z2L7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Crlf3Q9Z2L7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Crlf3Q9Z2L7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Crlf3Q9Z2L7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Crlf3Q9Z2L7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Crlf3Q9Z2L7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Crlf3Q9Z2L7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Crlf3Q9Z2L7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.27■□□□□ 0.67
Crlf3Q9Z2L7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Crlf3Q9Z2L7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms