Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Scn8aQ9WTU3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn8aQ9WTU3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Scn8aQ9WTU3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Scn8aQ9WTU3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn8aQ9WTU3 Gm6420-201ENSMUST00000193885 723 ntBASIC19.5■□□□□ 0.71
Scn8aQ9WTU3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.5■□□□□ 0.71
Scn8aQ9WTU3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn8aQ9WTU3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn8aQ9WTU3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn8aQ9WTU3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn8aQ9WTU3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn8aQ9WTU3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Scn8aQ9WTU3 Gm12933-201ENSMUST00000120203 872 ntBASIC19.5■□□□□ 0.71
Scn8aQ9WTU3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn8aQ9WTU3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn8aQ9WTU3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn8aQ9WTU3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn8aQ9WTU3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.49■□□□□ 0.71
Scn8aQ9WTU3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scn8aQ9WTU3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn8aQ9WTU3 Nespas-201ENSMUST00000143738 1083 ntBASIC19.49■□□□□ 0.71
Scn8aQ9WTU3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn8aQ9WTU3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn8aQ9WTU3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn8aQ9WTU3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn8aQ9WTU3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scn8aQ9WTU3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn8aQ9WTU3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn8aQ9WTU3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Scn8aQ9WTU3 Gm26524-201ENSMUST00000192339 390 ntBASIC19.48■□□□□ 0.71
Scn8aQ9WTU3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Scn8aQ9WTU3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn8aQ9WTU3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn8aQ9WTU3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Scn8aQ9WTU3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Scn8aQ9WTU3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn8aQ9WTU3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn8aQ9WTU3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Scn8aQ9WTU3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn8aQ9WTU3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn8aQ9WTU3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Scn8aQ9WTU3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Scn8aQ9WTU3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn8aQ9WTU3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.46■□□□□ 0.71
Scn8aQ9WTU3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn8aQ9WTU3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Scn8aQ9WTU3 Gm6211-202ENSMUST00000167849 925 ntBASIC19.46■□□□□ 0.71
Scn8aQ9WTU3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn8aQ9WTU3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Scn8aQ9WTU3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.7
Scn8aQ9WTU3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn8aQ9WTU3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Scn8aQ9WTU3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn8aQ9WTU3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Scn8aQ9WTU3 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.45■□□□□ 0.7
Scn8aQ9WTU3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Scn8aQ9WTU3 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.45■□□□□ 0.7
Scn8aQ9WTU3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn8aQ9WTU3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn8aQ9WTU3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn8aQ9WTU3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn8aQ9WTU3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn8aQ9WTU3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn8aQ9WTU3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scn8aQ9WTU3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.44■□□□□ 0.7
Scn8aQ9WTU3 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.44■□□□□ 0.7
Scn8aQ9WTU3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Scn8aQ9WTU3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn8aQ9WTU3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.44■□□□□ 0.7
Scn8aQ9WTU3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn8aQ9WTU3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scn8aQ9WTU3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.44■□□□□ 0.7
Scn8aQ9WTU3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.44■□□□□ 0.7
Scn8aQ9WTU3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scn8aQ9WTU3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Scn8aQ9WTU3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn8aQ9WTU3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Scn8aQ9WTU3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Scn8aQ9WTU3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Scn8aQ9WTU3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn8aQ9WTU3 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.43■□□□□ 0.7
Scn8aQ9WTU3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn8aQ9WTU3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn8aQ9WTU3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Scn8aQ9WTU3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn8aQ9WTU3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn8aQ9WTU3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn8aQ9WTU3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn8aQ9WTU3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Scn8aQ9WTU3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Scn8aQ9WTU3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn8aQ9WTU3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn8aQ9WTU3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn8aQ9WTU3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn8aQ9WTU3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn8aQ9WTU3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn8aQ9WTU3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn8aQ9WTU3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.42■□□□□ 0.7
Scn8aQ9WTU3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms