Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Mir6982-201ENSMUST00000184354 68 ntBASIC23.12■■□□□ 1.29
Scn11aQ9R053 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Scn11aQ9R053 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Scn11aQ9R053 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Scn11aQ9R053 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Scn11aQ9R053 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Scn11aQ9R053 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Scn11aQ9R053 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Scn11aQ9R053 Gm13836-201ENSMUST00000121159 501 ntBASIC23.1■■□□□ 1.29
Scn11aQ9R053 Gm10812-201ENSMUST00000099864 546 ntBASIC23.1■■□□□ 1.29
Scn11aQ9R053 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Scn11aQ9R053 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Scn11aQ9R053 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Scn11aQ9R053 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Scn11aQ9R053 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Scn11aQ9R053 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Scn11aQ9R053 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Scn11aQ9R053 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Scn11aQ9R053 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Scn11aQ9R053 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Scn11aQ9R053 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Scn11aQ9R053 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Scn11aQ9R053 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Scn11aQ9R053 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Scn11aQ9R053 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Scn11aQ9R053 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Scn11aQ9R053 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC23.08■■□□□ 1.29
Scn11aQ9R053 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC23.08■■□□□ 1.29
Scn11aQ9R053 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Scn11aQ9R053 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC23.08■■□□□ 1.29
Scn11aQ9R053 AC131586.2-201ENSMUST00000228370 1512 ntBASIC23.08■■□□□ 1.29
Scn11aQ9R053 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Scn11aQ9R053 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Scn11aQ9R053 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
Scn11aQ9R053 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Scn11aQ9R053 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Scn11aQ9R053 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Scn11aQ9R053 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Scn11aQ9R053 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Scn11aQ9R053 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC23.07■■□□□ 1.28
Scn11aQ9R053 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
Scn11aQ9R053 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Scn11aQ9R053 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
Scn11aQ9R053 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Scn11aQ9R053 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Scn11aQ9R053 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Scn11aQ9R053 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Scn11aQ9R053 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Scn11aQ9R053 Gm5408-201ENSMUST00000197998 747 ntBASIC23.06■■□□□ 1.28
Scn11aQ9R053 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Scn11aQ9R053 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Scn11aQ9R053 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Scn11aQ9R053 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Scn11aQ9R053 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Scn11aQ9R053 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Scn11aQ9R053 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Scn11aQ9R053 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Scn11aQ9R053 Gm6365-201ENSMUST00000054711 744 ntBASIC23.05■■□□□ 1.28
Scn11aQ9R053 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Scn11aQ9R053 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Scn11aQ9R053 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Scn11aQ9R053 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Scn11aQ9R053 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Scn11aQ9R053 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Scn11aQ9R053 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Scn11aQ9R053 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
Scn11aQ9R053 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC23.04■■□□□ 1.28
Scn11aQ9R053 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Scn11aQ9R053 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC23.04■■□□□ 1.28
Scn11aQ9R053 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Scn11aQ9R053 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
Scn11aQ9R053 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC23.04■■□□□ 1.28
Scn11aQ9R053 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Scn11aQ9R053 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Scn11aQ9R053 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Scn11aQ9R053 Gm38160-201ENSMUST00000193090 2499 ntBASIC23.03■■□□□ 1.28
Scn11aQ9R053 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Scn11aQ9R053 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Scn11aQ9R053 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC23.03■■□□□ 1.28
Scn11aQ9R053 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC23.03■■□□□ 1.28
Scn11aQ9R053 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC23.03■■□□□ 1.28
Scn11aQ9R053 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Scn11aQ9R053 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
Scn11aQ9R053 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Scn11aQ9R053 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Scn11aQ9R053 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Scn11aQ9R053 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Scn11aQ9R053 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Scn11aQ9R053 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Scn11aQ9R053 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Scn11aQ9R053 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Scn11aQ9R053 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
Scn11aQ9R053 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Scn11aQ9R053 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Scn11aQ9R053 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC23.01■■□□□ 1.27
Scn11aQ9R053 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Scn11aQ9R053 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC23.01■■□□□ 1.27
Scn11aQ9R053 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Scn11aQ9R053 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Scn11aQ9R053 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms