Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Clcf1Q9QZM3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Clcf1Q9QZM3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Clcf1Q9QZM3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcf1Q9QZM3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.38■□□□□ 0.37
Clcf1Q9QZM3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcf1Q9QZM3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcf1Q9QZM3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Clcf1Q9QZM3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Clcf1Q9QZM3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.38■□□□□ 0.37
Clcf1Q9QZM3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcf1Q9QZM3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcf1Q9QZM3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Clcf1Q9QZM3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clcf1Q9QZM3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcf1Q9QZM3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Clcf1Q9QZM3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcf1Q9QZM3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcf1Q9QZM3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.38■□□□□ 0.37
Clcf1Q9QZM3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clcf1Q9QZM3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcf1Q9QZM3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.37■□□□□ 0.37
Clcf1Q9QZM3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.37■□□□□ 0.37
Clcf1Q9QZM3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.37■□□□□ 0.37
Clcf1Q9QZM3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Clcf1Q9QZM3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcf1Q9QZM3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.37■□□□□ 0.37
Clcf1Q9QZM3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Clcf1Q9QZM3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcf1Q9QZM3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.37■□□□□ 0.37
Clcf1Q9QZM3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clcf1Q9QZM3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Clcf1Q9QZM3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Clcf1Q9QZM3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcf1Q9QZM3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clcf1Q9QZM3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcf1Q9QZM3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcf1Q9QZM3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcf1Q9QZM3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcf1Q9QZM3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcf1Q9QZM3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcf1Q9QZM3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcf1Q9QZM3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcf1Q9QZM3 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.36■□□□□ 0.37
Clcf1Q9QZM3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Clcf1Q9QZM3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clcf1Q9QZM3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcf1Q9QZM3 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcf1Q9QZM3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcf1Q9QZM3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clcf1Q9QZM3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcf1Q9QZM3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clcf1Q9QZM3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcf1Q9QZM3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcf1Q9QZM3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Clcf1Q9QZM3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcf1Q9QZM3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcf1Q9QZM3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Clcf1Q9QZM3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.34■□□□□ 0.37
Clcf1Q9QZM3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.34■□□□□ 0.37
Clcf1Q9QZM3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcf1Q9QZM3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcf1Q9QZM3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Clcf1Q9QZM3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.34■□□□□ 0.37
Clcf1Q9QZM3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcf1Q9QZM3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Clcf1Q9QZM3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcf1Q9QZM3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcf1Q9QZM3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcf1Q9QZM3 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcf1Q9QZM3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.33■□□□□ 0.36
Clcf1Q9QZM3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Clcf1Q9QZM3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcf1Q9QZM3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Clcf1Q9QZM3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.33■□□□□ 0.36
Clcf1Q9QZM3 Gm26571-201ENSMUST00000181399 666 ntBASIC17.33■□□□□ 0.36
Clcf1Q9QZM3 Gm42642-201ENSMUST00000200683 355 ntBASIC17.33■□□□□ 0.36
Clcf1Q9QZM3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcf1Q9QZM3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcf1Q9QZM3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcf1Q9QZM3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.33■□□□□ 0.36
Clcf1Q9QZM3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcf1Q9QZM3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcf1Q9QZM3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcf1Q9QZM3 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.33■□□□□ 0.36
Clcf1Q9QZM3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Clcf1Q9QZM3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clcf1Q9QZM3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcf1Q9QZM3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcf1Q9QZM3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcf1Q9QZM3 Gm27801-201ENSMUST00000184174 223 ntBASIC17.32■□□□□ 0.36
Clcf1Q9QZM3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcf1Q9QZM3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Clcf1Q9QZM3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcf1Q9QZM3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Clcf1Q9QZM3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Clcf1Q9QZM3 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.32■□□□□ 0.36
Clcf1Q9QZM3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcf1Q9QZM3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.31■□□□□ 0.36
Clcf1Q9QZM3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms