Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nr2e3Q9QXZ7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nr2e3Q9QXZ7 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nr2e3Q9QXZ7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
Nr2e3Q9QXZ7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.77■■□□□ 1.08
Nr2e3Q9QXZ7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nr2e3Q9QXZ7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Nr2e3Q9QXZ7 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Nr2e3Q9QXZ7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.77■■□□□ 1.07
Nr2e3Q9QXZ7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nr2e3Q9QXZ7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nr2e3Q9QXZ7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
Nr2e3Q9QXZ7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Nr2e3Q9QXZ7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nr2e3Q9QXZ7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Nr2e3Q9QXZ7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Nr2e3Q9QXZ7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nr2e3Q9QXZ7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nr2e3Q9QXZ7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nr2e3Q9QXZ7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Nr2e3Q9QXZ7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
Nr2e3Q9QXZ7 Gm9988-201ENSMUST00000069786 435 ntBASIC21.76■■□□□ 1.07
Nr2e3Q9QXZ7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Nr2e3Q9QXZ7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nr2e3Q9QXZ7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nr2e3Q9QXZ7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nr2e3Q9QXZ7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nr2e3Q9QXZ7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
Nr2e3Q9QXZ7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nr2e3Q9QXZ7 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Nr2e3Q9QXZ7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nr2e3Q9QXZ7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Nr2e3Q9QXZ7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nr2e3Q9QXZ7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nr2e3Q9QXZ7 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nr2e3Q9QXZ7 Gm18284-201ENSMUST00000172604 624 ntBASIC21.74■■□□□ 1.07
Nr2e3Q9QXZ7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.74■■□□□ 1.07
Nr2e3Q9QXZ7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Nr2e3Q9QXZ7 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.74■■□□□ 1.07
Nr2e3Q9QXZ7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Nr2e3Q9QXZ7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nr2e3Q9QXZ7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Nr2e3Q9QXZ7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nr2e3Q9QXZ7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
Nr2e3Q9QXZ7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
Nr2e3Q9QXZ7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nr2e3Q9QXZ7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Nr2e3Q9QXZ7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Nr2e3Q9QXZ7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nr2e3Q9QXZ7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Nr2e3Q9QXZ7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.73■■□□□ 1.07
Nr2e3Q9QXZ7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nr2e3Q9QXZ7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Nr2e3Q9QXZ7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.72■■□□□ 1.07
Nr2e3Q9QXZ7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nr2e3Q9QXZ7 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Nr2e3Q9QXZ7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nr2e3Q9QXZ7 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.72■■□□□ 1.07
Nr2e3Q9QXZ7 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.72■■□□□ 1.07
Nr2e3Q9QXZ7 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.72■■□□□ 1.07
Nr2e3Q9QXZ7 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.72■■□□□ 1.07
Nr2e3Q9QXZ7 Gm5874-201ENSMUST00000096101 508 ntBASIC21.72■■□□□ 1.07
Nr2e3Q9QXZ7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nr2e3Q9QXZ7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nr2e3Q9QXZ7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nr2e3Q9QXZ7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.72■■□□□ 1.07
Nr2e3Q9QXZ7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Nr2e3Q9QXZ7 Reep4-203ENSMUST00000226563 1444 ntBASIC21.72■■□□□ 1.07
Nr2e3Q9QXZ7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Nr2e3Q9QXZ7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Nr2e3Q9QXZ7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Nr2e3Q9QXZ7 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nr2e3Q9QXZ7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nr2e3Q9QXZ7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Nr2e3Q9QXZ7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nr2e3Q9QXZ7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nr2e3Q9QXZ7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nr2e3Q9QXZ7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Nr2e3Q9QXZ7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Nr2e3Q9QXZ7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Nr2e3Q9QXZ7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nr2e3Q9QXZ7 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nr2e3Q9QXZ7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nr2e3Q9QXZ7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Nr2e3Q9QXZ7 Gm7860-201ENSMUST00000121190 879 ntBASIC21.7■■□□□ 1.06
Nr2e3Q9QXZ7 Gm38205-201ENSMUST00000192243 258 ntBASIC21.7■■□□□ 1.06
Nr2e3Q9QXZ7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Nr2e3Q9QXZ7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nr2e3Q9QXZ7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Nr2e3Q9QXZ7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.7■■□□□ 1.06
Nr2e3Q9QXZ7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nr2e3Q9QXZ7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.69■■□□□ 1.06
Nr2e3Q9QXZ7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nr2e3Q9QXZ7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nr2e3Q9QXZ7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nr2e3Q9QXZ7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Nr2e3Q9QXZ7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nr2e3Q9QXZ7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nr2e3Q9QXZ7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nr2e3Q9QXZ7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms